Annotation details (ID: 1320)

Experiment ID: 186

Field Description
namealteration of the rat cecal microbiome during colonization with the helminth hymenolepis diminuta
sraprjna270622
datamd5e74c02fc1d19bbeb0eddf60f15ae1261
mapmd5aa06f66a41ed72b10e4ca8b97f8a4528

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No3
Field Description
descriptionlower in rats chronically infected with helminth
typediffexp
num_sequences3
regionv4
flags0
agentcalour
methodna
date2017-08-23
usernameamnon
privaten
allrattus
allrat
allsprague dawley
allresearch facility
allcaecum
allunited states of america
highcontrol
lowparasitic helminthiasis infectious disease
lowhymenolepis diminuta

Annotation not flagged as potentially problematic

Sequences

Ontology terms (including parents)

high: experimental factor na material property control role

low: cyclophyllidea disease by infectious agent cellular organisms continuant hymenolepididae cestoda disease entity na taxonomy root bilateria parasitic infectious disease material entity opisthokonta experimental factor eumetazoa platyhelminthes hymenolepis <cestoda> parasitic helminthiasis infectious disease organism eucestoda metazoa hymenolepis diminuta independent continuant eukaryota

all: cellular organisms rattus subdivision of tube gnathostomata <vertebrate> rattus norvegicus geographic location continuant organism part deuterostomia glires euteleostomi dipnotetrapodomorpha amniota boreoeutheria entity myomorpha geographic feature organ part united states of america na eutheria rodentia taxonomy root tetrapoda mammalia subdivision of digestive tract material anatomical entity muridae teleostomi chordata sprague dawley anthropogenic geographic feature bilateria material entity craniata <chordata> opisthokonta experimental factor vertebrata <metazoa> euarchontoglires eumetazoa anatomy basic component astronomical body part caecum digestive tract diverticulum sarcopterygii multicellular anatomical structure anatomical structure rat anatomical entity murinae research facility organism construction muroidea metazoa independent continuant theria <mammalia> fiat object eukaryota animal

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