Annotation details (ID: 1320)

Experiment ID: 186

Field Description
namealteration of the rat cecal microbiome during colonization with the helminth hymenolepis diminuta
sraprjna270622
datamd5e74c02fc1d19bbeb0eddf60f15ae1261
mapmd5aa06f66a41ed72b10e4ca8b97f8a4528

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No3
Field Description
descriptionlower in rats chronically infected with helminth
typediffexp
num_sequences3
regionv4
flags0
agentcalour
methodna
date2017-08-23
usernameamnon
privaten
allrattus
allrat
allsprague dawley
allresearch facility
allcaecum
allunited states of america
highcontrol
lowparasitic helminthiasis infectious disease
lowhymenolepis diminuta

Sequences

Ontology terms (including parents)

all: muridae deuterostomia sprague dawley vertebrata euarchontoglires bilateria organism part teleostomi murinae chordata craniata geographic location anthropogenic geographic feature fiat object experimental factor rat independent continuant gnathostomata mammalia digestive tract diverticulum na sarcopterygii tetrapoda rattus myomorpha entity subdivision of tube organism euteleostomi boreoeutheria amniota rattus norvegicus geographic feature material anatomical entity research facility eumetazoa organ part astronomical body part anatomical structure material entity glires eutheria caecum anatomy basic component multicellular anatomical structure anatomical entity root construction cellular organisms rodentia eukaryota continuant subdivision of digestive tract theria metazoa muroidea united states of america opisthokonta dipnotetrapodomorpha

high: role na material property experimental factor control

low: parasitic helminthiasis infectious disease parasitic infectious disease bilateria hymenolepis eucestoda disease by infectious agent experimental factor independent continuant na platyhelminthes cyclophyllidea entity organism hymenolepis diminuta eumetazoa material entity root cellular organisms eukaryota continuant hymenolepididae metazoa disease cestoda opisthokonta

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