Annotation details (ID: 1558)

Experiment ID: 213

Field Description
namemicrobial composition predicts genital tract inflammation and persistent bacterial vaginosis in adolescent south african women
sraerp017263
sraprjeb15497
datamd5be00de6a9d82c847811764b7cb7708b9
mapmd5e9463e5cf696c2ec45dd677f7f021225

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
213amnonlower in patients with bacterial vaginosis compared to healthy controls ( high in control compared to bacterial vaginosis in homo sapiens vagina south africa )2017-10-31v4No99
Field Description
descriptionlower in patients with bacterial vaginosis compared to healthy controls
typediffexp
num_sequences99
regionv4
flags0
agentcalour
methodna
date2017-10-31
usernameamnon
privaten
allhomo sapiens
allvagina
allsouth africa
highcontrol
lowbacterial vaginosis

Sequences

Ontology terms (including parents)

all: primates homo sapiens tetrapoda gnathostomata <vertebrate> amniota theria <mammalia> homininae catarrhini vertebrata <metazoa> opisthokonta eutheria teleostomi hominoidea eukaryota na euteleostomi haplorrhini craniata <chordata> deuterostomia boreoeutheria anatomical entity organism simiiformes material entity mesoderm-derived structure cellular organisms root chordata vagina euarchontoglires material anatomical entity sarcopterygii dipnotetrapodomorpha eumetazoa hominidae mammalia bilateria homo sub-saharan africa continent continuant experimental factor metazoa geographic location anatomy basic component africa organism part independent continuant anatomical structure south africa entity

high: experimental factor control material property role na

low: disease of anatomical entity vaginitis reproductive system disease female reproductive system disease disease vaginal disease na bacterial vaginosis

Problems / suggestions? Please email info AT dbbact DOT org