Annotation details (ID: 1637)

Experiment ID: 241

Field Description
name variation in microbiome lps immunogenicity contributes to autoimmunity in humans
sraprjna290380
httphttps://pubs.broadinstitute.org/diabimmune/three-country-cohort
datamd525c60c73729865b33ab63d304725bd06
mapmd5746eae02d250f4243ccc00206f0137a9

Annotations Details

Exp. ID User ID Description Date Region Sequences Status Flag
241amnonlower in babies from finland compared to estonia ( high in estonia compared to finland in feces homo sapiens infant age < 3 years )2017-11-13v4157approvedNo
Field Description
descriptionlower in babies from finland compared to estonia
typediffexp
num_sequences157
regionv4
flags0
agentcalour
methodper feature ranking followed by two group mean comparison
date2017-11-13
usernameamnon
privaten
highestonia
lowfinland
allfeces
allhomo sapiens
allinfant
allage < 3 years

Annotation not flagged as potentially problematic

Review status


Accepted (annotation has been reviewed by the dbBact team and accepted)

Sequences

Ontology terms (including parents)

high: eurasia geographic location continent estonia europe na

low: eurasia geographic location finland continent europe na

all: hominidae craniata <chordata> homo euarchontoglires anatomical structure cellular organisms dbbact root experimental factor feces deuterostomia developmental stage organism part gnathostomata <vertebrate> independent continuant nonmeat part of animal excreta tetrapoda homininae teleostomi haplorrhini metazoa eumetazoa sarcopterygii mammalia dipnotetrapodomorpha organism substance part of plant or animal vertebrata <metazoa> taxonomy root process euteleostomi theria <mammalia> homo sapiens age < 3 years primates continuant opisthokonta part of animal organism bilateria simiiformes catarrhini material entity boreoeutheria chordata animal body or body part anatomical entity eutheria material anatomical entity entity anatomy basic component hominoidea amniota eukaryota infant na

Problems / suggestions? Please email info AT dbbact DOT org