Annotation details (ID: 187)

Experiment ID: 51

Field Description
namehiv-associated gut microbiome
namean altered intestinal mucosal microbiome in hiv-1 infection is associated with mucosal and systemic immune activation and endotoxemia
srasrp033311
datamd5f9c3bfa30162624a88cf5178e166e960
mapmd5e6d2203341fac714c81eee89818327d6

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
51amnonlower in stool compared to biopsies ( high in biopsy site biopsy compared to feces in homo sapiens united states of america )2017-01-19v4No14
Field Description
descriptionlower in stool compared to biopsies
typediffexp
num_sequences14
regionv4
flags0
agentcalour
methodna
date2017-01-19
usernameamnon
privaten
highbiopsy site
highbiopsy
lowfeces
allhomo sapiens
allunited states of america

Sequences

Ontology terms (including parents)

all: eutheria hominidae homininae geographic location craniata <chordata> experimental factor bilateria united states of america simiiformes teleostomi catarrhini mammalia amniota euarchontoglires cellular organisms deuterostomia eukaryota dipnotetrapodomorpha opisthokonta homo sapiens theria <mammalia> na hominoidea boreoeutheria haplorrhini root eumetazoa homo tetrapoda chordata gnathostomata <vertebrate> entity metazoa independent continuant vertebrata <metazoa> sarcopterygii euteleostomi primates continuant organism material entity

high: planned process biopsy site process experimental factor experimental process collecting specimen from organism biopsy occurrent entity na site specimen collection process

low: part of plant or animal experimental factor anatomy basic component material anatomical entity nonmeat part of animal material entity anatomical entity excreta part of animal entity organism substance na feces continuant independent continuant organism part anatomical structure animal body or body part

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