Annotation details (ID: 187)

Experiment ID: 51

Field Description
namehiv-associated gut microbiome
namean altered intestinal mucosal microbiome in hiv-1 infection is associated with mucosal and systemic immune activation and endotoxemia
srasrp033311
datamd5f9c3bfa30162624a88cf5178e166e960
mapmd5e6d2203341fac714c81eee89818327d6

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
51amnonlower in stool compared to biopsies ( high in biopsy site biopsy compared to feces in homo sapiens united states of america )2017-01-19v4No6
Field Description
descriptionlower in stool compared to biopsies
typediffexp
num_sequences6
regionv4
flags0
agentcalour
methodna
date2017-01-19
usernameamnon
privaten
allhomo sapiens
allunited states of america
highbiopsy site
highbiopsy
lowfeces

Sequences

Ontology terms (including parents)

all: primates homo sapiens tetrapoda gnathostomata <vertebrate> amniota united states of america theria <mammalia> homininae catarrhini vertebrata <metazoa> opisthokonta eutheria teleostomi hominoidea eukaryota na euteleostomi haplorrhini craniata <chordata> deuterostomia boreoeutheria organism simiiformes material entity chordata cellular organisms root euarchontoglires sarcopterygii dipnotetrapodomorpha eumetazoa hominidae mammalia bilateria homo continuant experimental factor metazoa geographic location independent continuant entity

high: experimental factor collecting specimen from organism biopsy site planned process process specimen collection process site biopsy occurrent entity experimental process na

low: continuant experimental factor animal body or body part material anatomical entity anatomy basic component part of animal organism part excreta anatomical entity independent continuant anatomical structure part of plant or animal material entity entity organism substance feces nonmeat part of animal na

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