Annotation details (ID: 3046)

Experiment ID: 410

Field Description
namecompositional and temporal changes in the gut microbiome of pediatric ulcerative colitis patients are linked to disease course
sraprjna436359
datamd524f95e8c7cd67f37f1251c22d179490e
mapmd5fd2b4f7d06cf59a51bf0b935ab211181

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
410amnonlower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy site biopsy compared to feces in homo sapiens united states of america child ulcerative colitis )2018-11-22v4No110
Field Description
descriptionlower in feces compared to rectal biopsies in children with treatment naive uc
typediffexp
num_sequences110
regionv4
flags0
agentcalour
methodna
date2018-11-22
usernameamnon
privaten
highrectum
highbiopsy site
highbiopsy
lowfeces
allhomo sapiens
allunited states of america
allchild
allulcerative colitis

Sequences

Ontology terms (including parents)

all: primates homo sapiens disease of anatomical entity tetrapoda gnathostomata <vertebrate> amniota united states of america theria <mammalia> homininae catarrhini disease vertebrata <metazoa> opisthokonta eutheria child teleostomi hominoidea eukaryota na inflammatory bowel disease euteleostomi haplorrhini ulcerative colitis craniata <chordata> deuterostomia boreoeutheria gastrointestinal system disease organism simiiformes material entity chordata cellular organisms root euarchontoglires sarcopterygii intestinal disease dipnotetrapodomorpha eumetazoa hominidae mammalia bilateria homo colitis continuant experimental factor metazoa geographic location independent continuant entity

high: biopsy site digestive system na rectum collecting specimen from organism multicellular anatomical structure planned process anatomical entity subdivision of digestive tract experimental process material entity process subdivision of tube material anatomical entity specimen collection process site continuant experimental factor anatomy basic component organ part organism part biopsy occurrent independent continuant anatomical structure anatomical system entity

low: continuant experimental factor animal body or body part material anatomical entity anatomy basic component part of animal organism part excreta anatomical entity independent continuant anatomical structure part of plant or animal material entity entity organism substance feces nonmeat part of animal na

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