Annotation details (ID: 3046)

Experiment ID: 410

Field Description
namecompositional and temporal changes in the gut microbiome of pediatric ulcerative colitis patients are linked to disease course
sraprjna436359
datamd524f95e8c7cd67f37f1251c22d179490e
mapmd5fd2b4f7d06cf59a51bf0b935ab211181

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
410amnonlower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy site biopsy compared to feces in homo sapiens united states of america child ulcerative colitis )2018-11-22v4No118
Field Description
descriptionlower in feces compared to rectal biopsies in children with treatment naive uc
typediffexp
num_sequences118
regionv4
flags0
agentcalour
methodna
date2018-11-22
usernameamnon
privaten
highrectum
highbiopsy site
highbiopsy
lowfeces
allhomo sapiens
allunited states of america
allchild
allulcerative colitis

Sequences

Ontology terms (including parents)

all: eutheria hominidae homininae geographic location craniata <chordata> experimental factor disease of anatomical entity bilateria united states of america simiiformes teleostomi catarrhini mammalia amniota child euarchontoglires cellular organisms deuterostomia intestinal disease colitis eukaryota dipnotetrapodomorpha opisthokonta homo sapiens theria <mammalia> na hominoidea gastrointestinal system disease boreoeutheria ulcerative colitis inflammatory bowel disease haplorrhini root eumetazoa homo tetrapoda chordata gnathostomata <vertebrate> entity metazoa independent continuant vertebrata <metazoa> sarcopterygii euteleostomi primates disease continuant organism material entity

high: experimental factor material anatomical entity material entity anatomical entity subdivision of digestive tract rectum biopsy site biopsy multicellular anatomical structure na site subdivision of tube planned process anatomical system anatomy basic component experimental process entity digestive system independent continuant organ part process collecting specimen from organism occurrent continuant specimen collection process organism part anatomical structure

low: part of plant or animal experimental factor anatomy basic component material anatomical entity nonmeat part of animal material entity anatomical entity excreta part of animal entity organism substance na feces continuant independent continuant organism part anatomical structure animal body or body part

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