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||||||
| Field | Description |
|---|---|
| name | compositional and temporal changes in the gut microbiome of pediatric ulcerative colitis patients are linked to disease course |
| sra | prjna436359 |
| datamd5 | 24f95e8c7cd67f37f1251c22d179490e |
| mapmd5 | fd2b4f7d06cf59a51bf0b935ab211181 |
| Exp. ID | User ID | Description | Date | Region | Flag | Sequences |
|---|---|---|---|---|---|---|
| 410 | amnon | lower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy site biopsy compared to feces in homo sapiens united states of america child ulcerative colitis ) | 2018-11-22 | v4 | No | 118 |
| Field | Description |
|---|---|
| description | lower in feces compared to rectal biopsies in children with treatment naive uc |
| type | diffexp |
| num_sequences | 118 |
| region | v4 |
| flags | 0 |
| agent | calour |
| method | na |
| date | 2018-11-22 |
| username | amnon |
| private | n |
| high | rectum |
| high | biopsy site |
| high | biopsy |
| low | feces |
| all | homo sapiens |
| all | united states of america |
| all | child |
| all | ulcerative colitis |
high: site occurrent biopsy organ part collecting specimen from organism na specimen collection process independent continuant rectum organism part continuant subdivision of digestive tract anatomical system anatomical structure subdivision of tube experimental process process material entity biopsy site experimental factor anatomy basic component planned process digestive system entity anatomical entity material anatomical entity multicellular anatomical structure
low: excreta anatomy basic component material entity organism substance feces entity animal body or body part organism part anatomical entity continuant material anatomical entity nonmeat part of animal part of plant or animal na anatomical structure independent continuant part of animal experimental factor
all: colitis euteleostomi catarrhini geographic location united states of america eumetazoa amniota root homo sapiens opisthokonta eutheria na boreoeutheria independent continuant homo gnathostomata <vertebrate> craniata <chordata> inflammatory bowel disease vertebrata <metazoa> dipnotetrapodomorpha continuant disease sarcopterygii teleostomi cellular organisms child disease of anatomical entity hominoidea haplorrhini material entity ulcerative colitis intestinal disease mammalia experimental factor chordata dbbact root homininae metazoa euarchontoglires deuterostomia gastrointestinal system disease entity eukaryota hominidae bilateria tetrapoda organism simiiformes primates theria <mammalia>
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