Annotation details (ID: 4454)

Experiment ID: 569

Field Description
namenetwork construction of gastric microbiome and organization of microbial modules associated with gastric carcinogenesis
nameevaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16s rrna gene sequencing
sraprjna517480
doihttps://doi.org/10.1038/s41598-019-48925-4
doihttps://doi.org/10.1111/hel.12547
datamd55a9f6871f4fd7fdf8351c11bbd38270f
mapmd58ad82005b616de75c72a151a7f7301da

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
569amnonhigh freq. in gastric biopsies of patients positive for h. pylori (dominant homo sapiens, south korea, mucosa of stomach, stomach, biopsy, helicobacter pylori infectious disease)2019-12-16v3No5
Field Description
descriptionhigh freq. in gastric biopsies of patients positive for h. pylori
typedominant
num_sequences5
regionv3
flags0
agentcalour
methodna
date2019-12-16
usernameamnon
privaten
allhomo sapiens
allsouth korea
allmucosa of stomach
allstomach
allbiopsy
allhelicobacter pylori infectious disease

Sequences

Ontology terms (including parents)

all: planned process deuterostomia mucosa of stomach vertebrata <metazoa> euarchontoglires bilateria south korea organism part teleostomi stomach chordata infectious disease craniata <chordata> occurrent primates animal body or body part experimental factor helicobacter pylori infectious disease disposition independent continuant mucosa mammalia gnathostomata <vertebrate> specimen collection process part of animal gastrointestinal system mucosa organ meat homo sapiens na organ component layer sarcopterygii homininae hominoidea organ meat, digestive system tetrapoda entity subdivision of tube organism euteleostomi boreoeutheria organization collecting specimen from organism experimental process amniota haplorrhini country material anatomical entity eumetazoa organ part hominidae anatomical structure material entity catarrhini simiiformes biopsy material property meat part of animal homo anatomy basic component multicellular anatomical structure anatomical entity eutheria root cellular organisms eukaryota continuant part of plant or animal subdivision of digestive tract process theria <mammalia> bacterial disease metazoa disease opisthokonta dipnotetrapodomorpha

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