Annotation details (ID: 4454)

Experiment ID: 569

Field Description
nameevaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16s rrna gene sequencing
namenetwork construction of gastric microbiome and organization of microbial modules associated with gastric carcinogenesis
doihttps://doi.org/10.1111/hel.12547
doihttps://doi.org/10.1038/s41598-019-48925-4
sraprjna517480
mapmd58ad82005b616de75c72a151a7f7301da
datamd55a9f6871f4fd7fdf8351c11bbd38270f

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
569amnonhigh freq. in gastric biopsies of patients positive for h. pylori (dominant helicobacter pylori infectious disease, biopsy, stomach, mucosa of stomach, south korea, homo sapiens)2019-12-16v3No5
Field Description
descriptionhigh freq. in gastric biopsies of patients positive for h. pylori
typedominant
num_sequences5
regionv3
flags0
agentcalour
methodna
date2019-12-16
usernameamnon
privaten
allhelicobacter pylori infectious disease
allbiopsy
allstomach
allmucosa of stomach
allsouth korea
allhomo sapiens

Sequences

Ontology terms (including parents)

all: planned process deuterostomia mucosa of stomach vertebrata euarchontoglires bilateria south korea organism part teleostomi stomach chordata infectious disease primates occurrent geographic location mucosa animal body or body part experimental factor disposition independent continuant craniata helicobacter pylori infectious disease mammalia gnathostomata specimen collection process part of animal organ meat gastrointestinal system mucosa homo sapiens na organ meat, digestive system homininae organ component layer hominoidea sarcopterygii tetrapoda boreoeutheria euteleostomi subdivision of tube experimental process entity collecting specimen from organism organism organization amniota haplorrhini country material anatomical entity eumetazoa organ part hominidae anatomical structure material entity catarrhini meat part of animal simiiformes material property eutheria homo multicellular anatomical structure asia anatomy basic component biopsy anatomical entity root cellular organisms eukaryota continuant part of plant or animal subdivision of digestive tract korean peninsula east asia process continent theria bacterial disease metazoa disease eurasia opisthokonta dipnotetrapodomorpha

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