Annotation details (ID: 4454)

Experiment ID: 569

Field Description
namenetwork construction of gastric microbiome and organization of microbial modules associated with gastric carcinogenesis
nameevaluation of gastric microbiome and metagenomic function in patients with intestinal metaplasia using 16s rrna gene sequencing
sraprjna517480
doihttps://doi.org/10.1038/s41598-019-48925-4
doihttps://doi.org/10.1111/hel.12547
datamd55a9f6871f4fd7fdf8351c11bbd38270f
mapmd58ad82005b616de75c72a151a7f7301da

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
569amnonhigh freq. in gastric biopsies of patients positive for h. pylori (dominant homo sapiens, south korea, mucosa of stomach, stomach, biopsy, helicobacter pylori infectious disease)2019-12-16v3No5
Field Description
descriptionhigh freq. in gastric biopsies of patients positive for h. pylori
typedominant
num_sequences5
regionv3
flags0
agentcalour
methodna
date2019-12-16
usernameamnon
privaten
allhomo sapiens
allsouth korea
allmucosa of stomach
allstomach
allbiopsy
allhelicobacter pylori infectious disease

Sequences

Ontology terms (including parents)

all: eutheria material property hominidae homininae country part of plant or animal gastrointestinal system mucosa craniata <chordata> disposition organ meat bilateria material anatomical entity material entity simiiformes anatomical entity experimental factor teleostomi catarrhini mammalia subdivision of digestive tract helicobacter pylori infectious disease amniota euarchontoglires cellular organisms deuterostomia eukaryota dipnotetrapodomorpha opisthokonta meat part of animal homo sapiens biopsy infectious disease multicellular anatomical structure part of animal theria <mammalia> na specimen collection process hominoidea subdivision of tube boreoeutheria stomach planned process haplorrhini root eumetazoa bacterial disease anatomy basic component mucosa of stomach organ meat, digestive system homo tetrapoda experimental process chordata mucosa gnathostomata <vertebrate> entity independent continuant metazoa vertebrata <metazoa> sarcopterygii organ part euteleostomi primates organ component layer organization process south korea collecting specimen from organism occurrent disease continuant organism organism part anatomical structure animal body or body part

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