Annotation details (ID: 5392)

Experiment ID: 673

Field Description
namesalmonella enterica serovar typhimurium temporally modulates the enteric microbiota and host responses to overcome colonization resistance in swine
doidoi:10.1128/aem.01569-20
sraprjna612572
mapmd5c92a3e1fee6011a48a993a81b1ff1724
datamd5106cc340508db9b32477907dab4f9a5d

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
673amnondominant caecum, ascending colon, salmonellosis, salmonella enterica subsp. enterica serovar typhimurium, research facility, age 6 weeks, male, male organism, province of alberta, canada, pig, sus scrofa2020-09-28v4No17
Field Description
description
typedominant
num_sequences17
regionv4
flags0
agentcalour
methodna
date2020-09-28
usernameamnon
privaten
allcaecum
allascending colon
allsalmonellosis
allsalmonella enterica subsp. enterica serovar typhimurium
allresearch facility
allage 6 weeks
allmale
allmale organism
allprovince of alberta
allcanada
allpig
allsus scrofa

Sequences

Ontology terms (including parents)

all: saint kitts subdivision of digestive tract biological sex amniota province (poland) proximal-distal subdivision of colon physical object quality fiat object the republic of the maldives north america multicellular anatomical structure infectious disease laccadive sea na disease by infectious agent caribbean sea age 6 weeks male atoll astronomical body part tetrapoda caenogastropoda quality vertebrata <metazoa> independent continuant metazoa sarcopterygii organ part bacterial infectious disease continuant gastropoda eutheria material property leeward islands geographic location construction cellular organisms deuterostomia eukaryota maldives archipelago miedzychod county dipnotetrapodomorpha opisthokonta suidae parish of saint peter basseterre mollusca suina europe west indies geographic feature eurasia eumetazoa bacterial disease chordata entity salmonella enterica subsp. enterica serovar typhimurium truncatelloidea euteleostomi province of alberta greater poland voivodeship caecum specifically dependent continuant administrative atoll (maldives) material entity laurasiatheria province (canada) craniata <chordata> experimental factor material anatomical entity teleostomi littorinimorpha ascending colon bacteria theria <mammalia> subdivision of tube continent canada salmonellosis multicellular organism indian ocean region organism organism part disposition research facility bilateria anatomical entity organismal quality sus scrofa mammalia lesser antilles primary bacterial infectious disease oceans and seas sus saint kitts-nevis digestive tract diverticulum pig sex boreoeutheria lophotrochozoa root male anatomy basic component caecidae gnathostomata <vertebrate> gmina miedzychod anthropogenic geographic feature phenotypic sex disease protostomia poland male organism cetartiodactyla anatomical structure

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