Annotation details (ID: 5458)

Experiment ID: 683

Field Description
nameantibiotics-driven gut microbiome perturbation alters immunity to vaccines in humans
doihttps://doi.org/10.1016/j.cell.2019.08.010
sraprjna505336
mapmd53829d2d53e477c35ae9ee5684321b6db
datamd51023c166accf1dd7f41fad925fd5a533

Annotations Details

Exp. ID User ID Description Date Region Sequences Status Flag
683amnonlower in antibiotic treatment (combined 3 antibiotics) compared to pre-treatment ( high in control compared to metronidazole neomycin vancomycin antibiotic in state of california united states of america adult feces homo sapiens )2028-03-04v4301approvedNo
Field Description
descriptionlower in antibiotic treatment (combined 3 antibiotics) compared to pre-treatment
typediffexp
num_sequences301
regionv4
flags0
agentcalour
methodper feature ranking followed by two group mean comparison
date2028-03-04
usernameamnon
privaten
lowmetronidazole
lowneomycin
lowvancomycin
lowantibiotic
highcontrol
allstate of california
allunited states of america
alladult
allfeces
allhomo sapiens

Annotation not flagged as potentially problematic

Review status


Accepted (annotation has been reviewed by the dbBact team and accepted)

Sequences

Ontology terms (including parents)

high: experimental factor na material property control role

low: experimental factor na antibiotic vancomycin continuant metronidazole neomycin independent continuant chemical entity entity material entity

all: excreta cellular organisms hominidae geographic location continuant organism part deuterostomia euteleostomi dipnotetrapodomorpha amniota boreoeutheria entity developmental stage homo united states of america na north america eutheria continent taxonomy root hominoidea tetrapoda mammalia material anatomical entity contiguous united states of america feces teleostomi organism substance chordata adult catarrhini bilateria homo sapiens material entity craniata <chordata> opisthokonta experimental factor vertebrata <metazoa> part of plant or animal euarchontoglires simiiformes west region nonmeat part of animal eumetazoa anatomy basic component region (contiguous united states of america) homininae part of animal state of california haplorrhini sarcopterygii pacific division animal body or body part anatomical structure anatomical entity organism metazoa primates independent continuant process theria <mammalia> gnathostomata <vertebrate> eukaryota

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