Annotation details (ID: 5499)

Experiment ID: 689

Field Description
nameintegrated meta-omics reveals a fungus-associated bacteriome and distinct functional pathways in clostridioides difficile infection
doihttps://doi.org/10.1128/msphere.00454-19
sraprjna478949
mapmd5227feaa5c100a27accebdbcfbd53492d
datamd5ace95dd0acfd5703761e0eaf88481cdb

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
689amnon high in clostridium difficile infection clostridium difficile colitis compared to non c. diff diarrhea in diarrhea hospital adult tucson united states of america feces homo sapiens 2028-03-11v4No-4
Field Description
description
typediffexp
num_sequences-4
regionv4
flags0
agentcalour
methodna
date2028-03-11
usernameamnon
privaten
lownon c. diff diarrhea
highclostridium difficile infection
highclostridium difficile colitis
alldiarrhea
allhospital
alladult
alltucson
allunited states of america
allfeces
allhomo sapiens

Sequences

Ontology terms (including parents)

low: na non c. diff diarrhea

high: experimental factor disease of anatomical entity bacterial disease intestinal disease disposition infectious disease gastrointestinal system disease colitis material property disease clostridium difficile colitis inflammatory bowel disease clostridium difficile infection na

all: primates homo sapiens disease of anatomical entity geographic feature adult construction gnathostomata <vertebrate> tetrapoda public building part of animal theria <mammalia> united states of america amniota homininae building catarrhini material property disease vertebrata <metazoa> opisthokonta eutheria populated place, contiguous united states of america eukaryota contiguous united states of america teleostomi hominoidea na euteleostomi quality anthropogenic geographic feature developmental stage haplorrhini craniata <chordata> deuterostomia boreoeutheria phenotype phenotypic abnormality gastrointestinal system disease anatomical entity organism simiiformes nonmeat part of animal material entity animal body or body part chordata root cellular organisms euarchontoglires process sarcopterygii material anatomical entity dipnotetrapodomorpha eumetazoa excreta hominidae mammalia diarrhea bilateria homo organism substance abnormality of the digestive system continent part of plant or animal continuant experimental factor metazoa hospital geographic location anatomy basic component fiat object abdominal symptom organism part north america independent continuant anatomical structure astronomical body part entity feces tucson

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