Annotation details (ID: 5499)

Experiment ID: 689

Field Description
nameintegrated meta-omics reveals a fungus-associated bacteriome and distinct functional pathways in clostridioides difficile infection
doihttps://doi.org/10.1128/msphere.00454-19
sraprjna478949
mapmd5227feaa5c100a27accebdbcfbd53492d
datamd5ace95dd0acfd5703761e0eaf88481cdb

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
689amnon high in clostridium difficile infection clostridium difficile colitis compared to non c. diff diarrhea in diarrhea hospital adult tucson united states of america feces homo sapiens 2028-03-11v4No3
Field Description
description
typediffexp
num_sequences3
regionv4
flags0
agentcalour
methodna
date2028-03-11
usernameamnon
privaten
lownon c. diff diarrhea
highclostridium difficile infection
highclostridium difficile colitis
alldiarrhea
allhospital
alladult
alltucson
allunited states of america
allfeces
allhomo sapiens

Annotation not flagged as potentially problematic

Sequences

Ontology terms (including parents)

high: inflammatory bowel disease experimental factor na material property colitis clostridium difficile colitis disease of anatomical entity infectious disease intestinal disease disposition gastrointestinal system disease bacterial disease disease clostridium difficile infection

low: non c. diff diarrhea dbbact root

all: public building hospital cellular organisms excreta quality populated place, contiguous united states of america hominidae gnathostomata <vertebrate> geographic location continuant organism part deuterostomia euteleostomi dipnotetrapodomorpha amniota boreoeutheria entity geographic feature developmental stage homo united states of america na north america material property eutheria continent taxonomy root hominoidea tetrapoda mammalia material anatomical entity contiguous united states of america feces diarrhea teleostomi organism substance chordata adult catarrhini anthropogenic geographic feature homo sapiens material entity craniata <chordata> opisthokonta experimental factor bilateria vertebrata <metazoa> tucson part of plant or animal euarchontoglires simiiformes abdominal symptom nonmeat part of animal eumetazoa anatomy basic component homininae part of animal astronomical body part haplorrhini sarcopterygii abnormality of the digestive system animal body or body part anatomical structure anatomical entity building organism construction phenotype metazoa primates independent continuant process phenotypic abnormality theria <mammalia> fiat object eukaryota

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