Annotation details (ID: 5500)

Experiment ID: 689

Field Description
nameintegrated meta-omics reveals a fungus-associated bacteriome and distinct functional pathways in clostridioides difficile infection
doihttps://doi.org/10.1128/msphere.00454-19
sraprjna478949
mapmd5227feaa5c100a27accebdbcfbd53492d
datamd5ace95dd0acfd5703761e0eaf88481cdb

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
689amnon high in non c. diff diarrhea compared to clostridium difficile infection clostridium difficile colitis in diarrhea hospital adult tucson united states of america feces homo sapiens 2028-03-11v4No1
Field Description
description
typediffexp
num_sequences1
regionv4
flags0
agentcalour
methodna
date2028-03-11
usernameamnon
privaten
lowclostridium difficile infection
lowclostridium difficile colitis
highnon c. diff diarrhea
alldiarrhea
allhospital
alladult
alltucson
allunited states of america
allfeces
allhomo sapiens

Sequences

Ontology terms (including parents)

low: colitis material property inflammatory bowel disease clostridium difficile colitis disease of anatomical entity disposition clostridium difficile infection experimental factor bacterial disease infectious disease disease na gastrointestinal system disease intestinal disease

high: na non c. diff diarrhea

all: eutheria hominidae material property homininae diarrhea part of plant or animal geographic location craniata <chordata> experimental factor disease of anatomical entity bilateria material anatomical entity material entity united states of america simiiformes anatomical entity teleostomi catarrhini mammalia construction amniota public building euarchontoglires cellular organisms deuterostomia eukaryota fiat object building hospital homo sapiens opisthokonta nonmeat part of animal north america dipnotetrapodomorpha adult part of animal theria <mammalia> organism substance na excreta hominoidea gastrointestinal system disease boreoeutheria contiguous united states of america continent tucson geographic feature haplorrhini root eumetazoa astronomical body part anatomy basic component homo populated place, contiguous united states of america tetrapoda chordata gnathostomata <vertebrate> entity quality independent continuant vertebrata <metazoa> metazoa developmental stage sarcopterygii euteleostomi primates process abdominal symptom phenotype anthropogenic geographic feature phenotypic abnormality disease abnormality of the digestive system feces continuant organism organism part anatomical structure animal body or body part

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