Annotation details (ID: 5562)

Experiment ID: 700

Field Description
nameantibiotic affects the gut microbiota composition and expression of genes related to lipid metabolism and myofiber types in skeletal muscle of piglets
doihttps://doi.org/10.1186/s12917-020-02592-0
sraprjna430317
srasrp130427
mapmd565734389c687e7ce12d3502925d78fcd
datamd5b5ee83a031f0f5a2dfd1c36db67bb94e

Annotations Details

Exp. ID User ID Description Date Region Flag Sequences
700amnon high in colon compared to caecum in control age 2 months belgium research facility sus scrofa pig 2028-04-01v3No59
Field Description
description
typediffexp
num_sequences59
regionv3
flags0
agentcalour
methodna
date2028-04-01
usernameamnon
privaten
lowcaecum
highcolon
allcontrol
allage 2 months
allbelgium
allresearch facility
allsus scrofa
allpig

Sequences

Ontology terms (including parents)

low: experimental factor bilateria material anatomical entity material entity anatomical entity subdivision of digestive tract cellular organisms littorinimorpha eukaryota organism opisthokonta mollusca digestive tract diverticulum multicellular anatomical structure na subdivision of tube lophotrochozoa root eumetazoa anatomy basic component caecidae caenogastropoda entity truncatelloidea independent continuant metazoa organ part caecum protostomia continuant gastropoda organism part anatomical structure

high: polyphaga <coleoptera> geographic location experimental factor bilateria continuant material entity colon anatomical entity material anatomical entity neoptera subdivision of digestive tract panama mandibulata cellular organisms eukaryota arthropoda holometabola pancrustacea opisthokonta north america insecta pterygota <winged insects> multicellular anatomical structure panarthropoda na hexapoda subdivision of tube staphylinoidea continent root eumetazoa anatomy basic component ecdysozoa entity independent continuant metazoa organ part coleoptera populated place, panama protostomia dicondylia central america leiodidae coloninae organism organism part anatomical structure staphyliniformia

all: eutheria material property laurasiatheria geographic location craniata <chordata> experimental factor research facility bilateria construction sus scrofa teleostomi mammalia amniota belgium age 2 months cellular organisms deuterostomia eukaryota fiat object dipnotetrapodomorpha opisthokonta suidae role sus pig theria <mammalia> na boreoeutheria suina europe continent geographic feature root eumetazoa eurasia astronomical body part control tetrapoda chordata gnathostomata <vertebrate> entity independent continuant vertebrata <metazoa> metazoa sarcopterygii euteleostomi anthropogenic geographic feature continuant organism cetartiodactyla material entity

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