Experiment ID: 1006

Field Description
namehost genetics and environment shape the composition of the gastrointestinal microbiome in nonhuman primates
sraprjna772263
doihttps://doi.org/10.1128/spectrum.02139-22
datamd5f919d5f31a726925c7c16905fb42f6ac
mapmd55d429ae6c45775bfc5c24e74871e4daf

Annotations for experiment:

term enrichment score
TermScore
bethesda0.666667
state of maryland0.400000
pig tailed macaque monkey0.333333
sabaeus monkey0.333333
chlorocebus pygerythrus0.333333
macaca nemestrina0.285714
rhesus macaque0.285714
chlorocebus sabaeus0.285714
vervet monkey0.250000
macaca mulatta0.166667
monkey0.105263
captive0.062500
research facility0.010753
united states of america0.006849
feces0.004773
Fraction of dbbact annotations with this term covered by the query
TermScore
bethesda0.500000
pig tailed macaque monkey0.500000
sabaeus monkey0.500000
chlorocebus pygerythrus0.500000
macaca nemestrina0.333333
rhesus macaque0.333333
chlorocebus sabaeus0.333333
state of maryland0.250000
vervet monkey0.250000
macaca mulatta0.125000
monkey0.055556
captive0.032258
research facility0.005405
united states of america0.003436
feces0.002392
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
research facility1.000000
state of maryland1.000000
monkey1.000000
captive1.000000
bethesda1.000000
macaca nemestrina0.250000
pig tailed macaque monkey0.250000
macaca mulatta0.250000
rhesus macaque0.250000
chlorocebus sabaeus0.250000
sabaeus monkey0.250000
vervet monkey0.250000
chlorocebus pygerythrus0.250000
Number of experiments associating the term to the sequence
TermScore
feces1.000000
united states of america1.000000
research facility1.000000
state of maryland1.000000
monkey1.000000
captive1.000000
macaca nemestrina1.000000
bethesda1.000000
pig tailed macaque monkey1.000000
macaca mulatta1.000000
rhesus macaque1.000000
chlorocebus sabaeus1.000000
sabaeus monkey1.000000
vervet monkey1.000000
chlorocebus pygerythrus1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
1006amnondominant feces, united states of america, research facility, macaca mulatta, state of maryland, monkey, captive, bethesda, rhesus macaque2023-01-09v41 / 9approvedNo
1006amnondominant feces, united states of america, research facility, state of maryland, monkey, vervet monkey, captive, bethesda, chlorocebus pygerythrus2023-01-08v41 / 12approvedNo
1006amnondominant feces, united states of america, research facility, state of maryland, monkey, captive, macaca nemestrina, bethesda, pig tailed macaque monkey2023-01-08v41 / 13approvedNo
1006amnondominant feces, united states of america, research facility, state of maryland, monkey, captive, chlorocebus sabaeus, bethesda, sabaeus monkey2023-01-08v41 / 18approvedNo
1006amnoncommon feces, united states of america, research facility, state of maryland, monkey, vervet monkey, captive, bethesda, chlorocebus pygerythrus2023-01-08v41 / 222approvedNo
1006amnoncommon feces, united states of america, research facility, state of maryland, monkey, captive, chlorocebus sabaeus, bethesda, sabaeus monkey2023-01-08v41 / 282approvedNo
1006amnoncommon feces, united states of america, research facility, macaca mulatta, state of maryland, monkey, captive, bethesda, rhesus macaque2023-01-09v41 / 318approvedNo
1006amnoncommon feces, united states of america, research facility, state of maryland, monkey, captive, macaca nemestrina, bethesda, pig tailed macaque monkey2023-01-08v41 / 514approvedNo

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