dbBact

Field	Description
name	diet-induced remission in chronic enteropathy is associated with altered microbial community structure and synthesis of secondary bile acids
sra	prjna515316
doi	https://doi.org/10.1186/s40168-019-0740-4
datamd5	f7b9b6a32366fe34a7d79683ca312695
mapmd5	1213b5748f958a6cfc15bfb9037321d2

term enrichment score

Term	Score
abnormality of the intestine	0.500000
chronic enteropathy	0.500000
canine chronic enteropathy	0.500000
LOWER IN abnormality of the intestine	0.166667
LOWER IN chronic enteropathy	0.166667
LOWER IN canine chronic enteropathy	0.166667
LOWER IN no antimicrobial treatment	0.166667
commonwealth of pennsylvania	0.153846
no antimicrobial treatment	0.153846
hydrolized diet	0.153846
LOWER IN dog food diet	0.153846
LOWER IN hydrolized diet	0.153846
dog food diet	0.142857
LOWER IN	0.133333
LOWER IN antibiotic	0.071429
antibiotic	0.066667
dog	0.064516
canis lupus familiaris	0.057143
control	0.009160
LOWER IN control	0.009091
united states of america	0.006780
feces	0.004739

Fraction of dbbact annotations with this term covered by the query

Term	Score
abnormality of the intestine	0.500000
chronic enteropathy	0.500000
canine chronic enteropathy	0.500000
LOWER IN abnormality of the intestine	0.500000
LOWER IN chronic enteropathy	0.500000
LOWER IN canine chronic enteropathy	0.500000
LOWER IN no antimicrobial treatment	0.500000
no antimicrobial treatment	0.333333
hydrolized diet	0.333333
LOWER IN dog food diet	0.333333
LOWER IN hydrolized diet	0.333333
dog food diet	0.250000
LOWER IN	0.200000
commonwealth of pennsylvania	0.083333
LOWER IN antibiotic	0.055556
antibiotic	0.050000
dog	0.033333
canis lupus familiaris	0.029412
LOWER IN control	0.004762
control	0.004651
united states of america	0.003401
feces	0.002375

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
united states of america	1.000000
canis lupus familiaris	1.000000
commonwealth of pennsylvania	1.000000
dog	1.000000
abnormality of the intestine	0.500000
chronic enteropathy	0.500000
canine chronic enteropathy	0.500000
control	0.300000
LOWER IN abnormality of the intestine	0.100000
LOWER IN chronic enteropathy	0.100000
LOWER IN canine chronic enteropathy	0.100000
no antimicrobial treatment	0.100000
LOWER IN antibiotic	0.100000
LOWER IN	0.100000
hydrolized diet	0.100000
LOWER IN dog food diet	0.100000
dog food diet	0.100000
LOWER IN hydrolized diet	0.100000
antibiotic	0.100000
LOWER IN no antimicrobial treatment	0.100000
LOWER IN control	0.100000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
control	1.000000
united states of america	1.000000
canis lupus familiaris	1.000000
commonwealth of pennsylvania	1.000000
dog	1.000000
abnormality of the intestine	1.000000
chronic enteropathy	1.000000
canine chronic enteropathy	1.000000
LOWER IN abnormality of the intestine	1.000000
LOWER IN chronic enteropathy	1.000000
LOWER IN canine chronic enteropathy	1.000000
no antimicrobial treatment	1.000000
LOWER IN antibiotic	1.000000
LOWER IN	1.000000
hydrolized diet	1.000000
LOWER IN dog food diet	1.000000
dog food diet	1.000000
LOWER IN hydrolized diet	1.000000
antibiotic	1.000000
LOWER IN no antimicrobial treatment	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
1010	amnon	high in abnormality of the intestine chronic enteropathy canine chronic enteropathy compared to control in feces united states of america canis lupus familiaris commonwealth of pennsylvania dog	2023-02-02	v4	1 / 1	approved	No
1010	amnon	high in antibiotic compared to no antimicrobial treatment in feces united states of america canis lupus familiaris commonwealth of pennsylvania dog abnormality of the intestine chronic enteropathy canine chronic enteropathy	2023-02-02	v4	1 / 6	approved	No
1010	amnon	high in dog food diet compared to hydrolized diet in feces united states of america canis lupus familiaris commonwealth of pennsylvania dog	2023-02-02	v4	1 / 7	approved	No
1010	amnon	high in hydrolized diet compared to dog food diet in feces united states of america canis lupus familiaris commonwealth of pennsylvania dog	2023-02-02	v4	1 / 9	approved	No
1010	amnon	high in control compared to abnormality of the intestine chronic enteropathy canine chronic enteropathy in feces united states of america canis lupus familiaris commonwealth of pennsylvania dog	2023-02-02	v4	1 / 13	approved	No
1010	amnon	high in no antimicrobial treatment compared to antibiotic in feces united states of america canis lupus familiaris commonwealth of pennsylvania dog abnormality of the intestine chronic enteropathy canine chronic enteropathy	2023-02-02	v4	1 / 13	approved	No
1010	amnon	dominant feces, united states of america, canis lupus familiaris, commonwealth of pennsylvania, dog, abnormality of the intestine, chronic enteropathy, canine chronic enteropathy	2023-02-02	v4	1 / 23	approved	No
1010	amnon	dominant feces, control, united states of america, canis lupus familiaris, commonwealth of pennsylvania, dog	2023-02-02	v4	1 / 23	approved	No
1010	amnon	common feces, united states of america, canis lupus familiaris, commonwealth of pennsylvania, dog, abnormality of the intestine, chronic enteropathy, canine chronic enteropathy	2023-02-02	v4	1 / 26	approved	No
1010	amnon	common feces, control, united states of america, canis lupus familiaris, commonwealth of pennsylvania, dog	2023-02-02	v4	1 / 49	approved	No

Experiment ID: 1010

Annotations for experiment: