Experiment ID: 102

Field Description
nameoral microbiome in hiv-associated periodontitis
srasrp079702
datamd5185734e4343b0f830c6dbba4b42b4af5
mapmd5dbe41c67e5bb528881817fdce7e92c91

Annotations for experiment:

term enrichment score
TermScore
atlanta1.000000
cheek0.476190
LOWER IN cheek0.266667
periodontitis0.133333
LOWER IN periodontitis0.133333
LOWER IN hiv infection0.129032
hiv infection0.129032
mouth0.080000
dentition0.077670
LOWER IN dentition0.075000
LOWER IN saliva0.040268
saliva0.038835
LOWER IN control0.010601
control0.010601
united states of america0.008065
homo sapiens0.007353
Fraction of dbbact annotations with this term covered by the query
TermScore
atlanta1.000000
LOWER IN cheek0.500000
cheek0.500000
periodontitis0.250000
LOWER IN periodontitis0.250000
LOWER IN hiv infection0.100000
hiv infection0.100000
LOWER IN dentition0.043478
dentition0.043478
mouth0.041667
saliva0.021739
LOWER IN saliva0.021739
LOWER IN control0.005405
control0.005405
united states of america0.004049
homo sapiens0.003690
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
atlanta1.000000
mouth1.000000
cheek0.454545
dentition0.363636
LOWER IN dentition0.272727
LOWER IN saliva0.272727
LOWER IN control0.272727
control0.272727
saliva0.181818
LOWER IN cheek0.181818
LOWER IN hiv infection0.181818
hiv infection0.181818
periodontitis0.090909
LOWER IN periodontitis0.090909
Exp. ID User ID Description Date Region Flag Sequences
102amnon high in hiv infection compared to control in homo sapiens united states of america cheek atlanta mouth 2017-04-04v4No1 / 2
102amnon high in hiv infection compared to control in homo sapiens united states of america dentition atlanta mouth 2017-04-04v4No1 / 4
102amnon high in control compared to periodontitis in homo sapiens united states of america atlanta mouth 2017-04-04v4No1 / 7
102amnon high in control compared to hiv infection in homo sapiens united states of america cheek atlanta mouth 2017-04-04v4No1 / 15
102amnon high in control compared to hiv infection in homo sapiens united states of america dentition atlanta mouth 2017-04-04v4No1 / 18
102amnonlower in teeth compared to cheeks, saliva ( high in saliva cheek compared to dentition in homo sapiens united states of america atlanta mouth )2017-04-03v4No1 / 37
102amnonlower in saliva compared to teeth, cheek ( high in cheek dentition compared to saliva in homo sapiens united states of america atlanta mouth )2017-04-03v4No1 / 39
102amnonhigher in cheeks compared to teeth, saliva ( high in cheek compared to saliva dentition in homo sapiens united states of america atlanta mouth )2017-04-03v4No1 / 41
102amnon high in periodontitis compared to control in homo sapiens united states of america atlanta mouth 2017-04-04v4No1 / 53
102amnonhigher in teeth compared to cheeks, saliva ( high in dentition compared to saliva cheek in homo sapiens united states of america atlanta mouth )2017-04-03v4No1 / 63
102amnonhigher in saliva compared to teeth, cheek ( high in saliva compared to cheek dentition in homo sapiens united states of america atlanta mouth )2017-04-03v4No1 / 65

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