Experiment ID: 102

Field Description
nameoral microbiome in hiv-associated periodontitis
srasrp079702
datamd5185734e4343b0f830c6dbba4b42b4af5
mapmd5dbe41c67e5bb528881817fdce7e92c91

Annotations for experiment:

term enrichment score
TermScore
atlanta0.500000
cheek0.476190
LOWER IN dentition0.300000
LOWER IN cheek0.266667
LOWER IN hiv infection0.190476
LOWER IN saliva0.187500
hiv infection0.173913
dentition0.145455
periodontitis0.105263
LOWER IN periodontitis0.105263
mouth0.100000
saliva0.078431
LOWER IN control0.018750
control0.018405
homo sapiens0.015152
united states of america0.012346
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN cheek0.500000
cheek0.500000
atlanta0.333333
LOWER IN dentition0.333333
LOWER IN hiv infection0.200000
hiv infection0.166667
LOWER IN saliva0.142857
periodontitis0.125000
LOWER IN periodontitis0.125000
dentition0.090909
mouth0.052632
saliva0.050000
LOWER IN control0.009709
control0.009524
homo sapiens0.007634
united states of america0.006211
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
mouth1.000000
atlanta1.000000
united states of america1.000000
cheek0.454545
dentition0.363636
LOWER IN dentition0.272727
LOWER IN saliva0.272727
LOWER IN control0.272727
control0.272727
saliva0.181818
LOWER IN cheek0.181818
LOWER IN hiv infection0.181818
hiv infection0.181818
periodontitis0.090909
LOWER IN periodontitis0.090909
Exp. ID User ID Description Date Sequences
102amnon high in hiv infection compared to control in homo sapiens mouth atlanta united states of america cheek 2017-04-041 / 2
102amnon high in hiv infection compared to control in homo sapiens mouth atlanta united states of america dentition 2017-04-041 / 4
102amnon high in control compared to periodontitis in homo sapiens mouth atlanta united states of america 2017-04-041 / 7
102amnon high in control compared to hiv infection in homo sapiens mouth atlanta united states of america cheek 2017-04-041 / 15
102amnon high in control compared to hiv infection in homo sapiens mouth atlanta united states of america dentition 2017-04-041 / 18
102amnonlower in teeth compared to cheeks, saliva ( high in saliva cheek compared to dentition in homo sapiens mouth atlanta united states of america )2017-04-031 / 37
102amnonlower in saliva compared to teeth, cheek ( high in dentition cheek compared to saliva in homo sapiens mouth atlanta united states of america )2017-04-031 / 39
102amnonhigher in cheeks compared to teeth, saliva ( high in cheek compared to saliva dentition in homo sapiens mouth atlanta united states of america )2017-04-031 / 41
102amnon high in periodontitis compared to control in homo sapiens mouth atlanta united states of america 2017-04-041 / 53
102amnonhigher in teeth compared to cheeks, saliva ( high in dentition compared to saliva cheek in homo sapiens mouth atlanta united states of america )2017-04-031 / 63
102amnonhigher in saliva compared to teeth, cheek ( high in saliva compared to dentition cheek in homo sapiens mouth atlanta united states of america )2017-04-031 / 65

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