Experiment ID: 103

Field Description
namepatterns of variation in diversity of the mississippi river microbiome over 1,300 kilometers
srasrp095502
sraprjna356973
datamd52064ccd5242f0c77bab17b069ef22c8c
mapmd5d980fe54a8c9f9586684c3b6422d2f06

Annotations for experiment:

term enrichment score
TermScore
aquatic biome0.666667
mississippi river0.400000
free floating0.400000
particle0.363636
downstream0.222222
LOWER IN upstream0.222222
upstream0.222222
LOWER IN downstream0.222222
river0.181818
particles0.166667
fresh water0.153846
LOWER IN free floating0.153846
LOWER IN particle0.153846
united states of america0.012346
Fraction of dbbact annotations with this term covered by the query
TermScore
aquatic biome0.500000
particles0.500000
LOWER IN free floating0.333333
particle0.333333
free floating0.333333
LOWER IN particle0.333333
mississippi river0.250000
downstream0.250000
LOWER IN upstream0.250000
upstream0.250000
LOWER IN downstream0.250000
river0.100000
fresh water0.083333
united states of america0.006211
Fraction of annotations for the query sequences containing the term
TermScore
river1.000000
united states of america1.000000
mississippi river1.000000
fresh water1.000000
aquatic biome1.000000
free floating0.500000
particle0.400000
downstream0.200000
LOWER IN upstream0.200000
upstream0.200000
LOWER IN downstream0.200000
particles0.100000
LOWER IN free floating0.100000
LOWER IN particle0.100000
Exp. ID User ID Description Date Sequences
103amnonhighfreq river, united states of america, mississippi river, fresh water, aquatic biome, particle2017-04-051 / 7
103amnonhighfreq river, united states of america, mississippi river, fresh water, aquatic biome, free floating2017-04-051 / 7
103amnon high in upstream compared to downstream in river united states of america mississippi river fresh water aquatic biome particle 2017-04-051 / 256
103amnon high in upstream compared to downstream in river united states of america mississippi river fresh water aquatic biome free floating 2017-04-051 / 257
103amnonlower in particle bound fraction compared to free floating bacteria in mississippi river ( high in free floating compared to particle in river united states of america mississippi river fresh water aquatic biome )2017-04-051 / 653
103amnon high in downstream compared to upstream in river united states of america mississippi river fresh water aquatic biome free floating 2017-04-051 / 703
103amnoncommon river, united states of america, mississippi river, fresh water, aquatic biome, particle2017-04-051 / 909
103amnoncommon river, united states of america, mississippi river, fresh water, aquatic biome, free floating2017-04-051 / 909
103amnon high in downstream compared to upstream in river united states of america mississippi river fresh water aquatic biome particle 2017-04-051 / 1032
103amnonhigher in particle bound fraction compared to free floating bacteria in mississippi river ( high in particles compared to free floating in river united states of america mississippi river fresh water aquatic biome )2017-04-051 / 3559

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