dbBact

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Experiment ID: 104

Field	Description
name	identification of key components of the healthy periodontium microbiome that protect against aggressive periodontitis by metagenomic sequencing
sra	srp044888
sra	prjna256234
datamd5	abcd66e2c10ef90085c7339160abbff9
mapmd5	9998ac8987f972387712380d60c3e060

Annotations for experiment:

term enrichment score

Term	Score
moscow	0.666667
periodontitis	0.250000
LOWER IN periodontitis	0.250000
russia	0.181818
subgingival plaque	0.133333
dentition	0.083333
mouth	0.080000
LOWER IN control	0.010582
control	0.010582
homo sapiens	0.007353

Fraction of dbbact annotations with this term covered by the query

Term	Score
moscow	0.500000
periodontitis	0.250000
LOWER IN periodontitis	0.250000
russia	0.100000
subgingival plaque	0.071429
dentition	0.043478
mouth	0.041667
LOWER IN control	0.005405
control	0.005405
homo sapiens	0.003690

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
dentition	1.000000
russia	1.000000
moscow	1.000000
subgingival plaque	1.000000
mouth	1.000000
periodontitis	0.250000
LOWER IN control	0.250000
control	0.250000
LOWER IN periodontitis	0.250000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
104	amnon	high in control compared to periodontitis in homo sapiens dentition russia moscow subgingival plaque mouth	2017-04-05	v4	No	1 / 3
104	amnon	high in periodontitis compared to control in homo sapiens dentition russia moscow subgingival plaque mouth	2017-04-05	v4	No	1 / 5
104	amnon	dominant homo sapiens, dentition, russia, moscow, subgingival plaque, mouth	2017-04-05	v4	No	1 / 27
104	amnon	common homo sapiens, dentition, russia, moscow, subgingival plaque, mouth	2017-04-05	v4	No	1 / 227

Problems / suggestions? Please email info AT dbbact DOT org