Experiment ID: 114

Field Description
namelarval exposure to polychlorinated biphenyl 126 (pcb-126) causes persistent alteration of the amphibian gut microbiota
srasrp019766
srasrp019766
datamd53839cd213e2b07ada0f9e0f585522102
mapmd55ed831e48c845d091eaec3bccab959f2

Annotations for experiment:

term enrichment score
TermScore
rana pipiens0.666667
northern leopard frog0.666667
state of wisconsin0.400000
digesta0.333333
tadpole0.263158
polychlorinated biphenyl 1260.200000
pcb0.200000
contaminated water0.200000
LOWER IN polychlorinated biphenyl 1260.200000
LOWER IN pcb0.200000
LOWER IN contaminated water0.200000
LOWER IN tadpole0.153846
intestine0.086957
LOWER IN adult0.064516
research facility0.015625
adult0.013921
LOWER IN control0.011905
control0.011834
united states of america0.008850
Fraction of dbbact annotations with this term covered by the query
TermScore
rana pipiens0.500000
northern leopard frog0.500000
polychlorinated biphenyl 1260.500000
pcb0.500000
contaminated water0.500000
LOWER IN polychlorinated biphenyl 1260.500000
LOWER IN pcb0.500000
LOWER IN contaminated water0.500000
state of wisconsin0.250000
digesta0.200000
LOWER IN tadpole0.200000
tadpole0.166667
intestine0.045455
LOWER IN adult0.043478
research facility0.007874
adult0.007092
LOWER IN control0.006250
control0.006211
united states of america0.004444
Fraction of annotations for the query sequences containing the term
TermScore
rana pipiens1.000000
northern leopard frog1.000000
research facility1.000000
digesta1.000000
intestine1.000000
state of wisconsin1.000000
united states of america1.000000
tadpole0.625000
adult0.375000
LOWER IN adult0.125000
LOWER IN tadpole0.125000
polychlorinated biphenyl 1260.125000
pcb0.125000
contaminated water0.125000
LOWER IN control0.125000
control0.125000
LOWER IN polychlorinated biphenyl 1260.125000
LOWER IN pcb0.125000
LOWER IN contaminated water0.125000
Exp. ID User ID Description Date Region Flag Sequences
114amnon high in control compared to polychlorinated biphenyl 126 pcb contaminated water in rana pipiens northern leopard frog research facility digesta intestine state of wisconsin united states of america tadpole 2017-04-10v4No1 / -7
114amnondominant rana pipiens, northern leopard frog, adult, research facility, digesta, intestine, state of wisconsin, united states of america2017-04-10v4No1 / -7
114amnon high in polychlorinated biphenyl 126 pcb contaminated water compared to control in rana pipiens northern leopard frog research facility digesta intestine state of wisconsin united states of america tadpole 2017-04-10v4No1 / -6
114amnondominant rana pipiens, northern leopard frog, research facility, digesta, intestine, state of wisconsin, united states of america, tadpole2017-04-10v4No1 / 18
114amnon high in adult compared to tadpole in rana pipiens northern leopard frog research facility digesta intestine state of wisconsin united states of america 2017-04-10v4No1 / 59
114amnoncommon rana pipiens, northern leopard frog, adult, research facility, digesta, intestine, state of wisconsin, united states of america2017-04-10v4No1 / 64
114amnoncommon rana pipiens, northern leopard frog, research facility, digesta, intestine, state of wisconsin, united states of america, tadpole2017-04-10v4No1 / 76
114amnon high in tadpole compared to adult in rana pipiens northern leopard frog research facility digesta intestine state of wisconsin united states of america 2017-04-10v4No1 / 82

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