Experiment ID: 13

Field Description
namespatial heterogeneity of gut microbial composition along the gastrointestinal tract in natural populations of house mice
sraerp016947
sraprjeb15238
datamd540c3c1bc42d28ba0baf43fa63e1828dd
mapmd53e764deaff3855d5bf42a0374f9c959e

Annotations for experiment:

term enrichment score
TermScore
LOWER IN esophagus0.500000
esophagus0.500000
gastrointestinal system0.400000
LOWER IN rectum0.250000
LOWER IN mouth0.222222
LOWER IN stomach0.222222
LOWER IN duodenum0.200000
LOWER IN ileum0.200000
ileum0.200000
rectum0.181818
duodenum0.181818
LOWER IN caecum0.166667
stomach0.142857
LOWER IN colon0.125000
LOWER IN feces0.117647
colon0.095238
mouth0.090909
caecum0.083333
mus musculus0.035088
united states of america0.010870
feces0.010050
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN esophagus0.500000
esophagus0.500000
gastrointestinal system0.250000
LOWER IN rectum0.166667
LOWER IN mouth0.142857
LOWER IN stomach0.142857
LOWER IN duodenum0.125000
LOWER IN ileum0.125000
ileum0.125000
rectum0.111111
duodenum0.111111
LOWER IN caecum0.100000
stomach0.083333
LOWER IN colon0.071429
LOWER IN feces0.066667
colon0.052632
mouth0.050000
caecum0.045455
mus musculus0.017857
united states of america0.005464
feces0.005076
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
united states of america1.000000
gastrointestinal system1.000000
caecum0.500000
colon0.500000
rectum0.500000
feces0.500000
LOWER IN mouth0.500000
LOWER IN esophagus0.500000
LOWER IN stomach0.500000
LOWER IN duodenum0.500000
LOWER IN ileum0.500000
mouth0.500000
esophagus0.500000
stomach0.500000
duodenum0.500000
ileum0.500000
LOWER IN caecum0.500000
LOWER IN colon0.500000
LOWER IN rectum0.500000
LOWER IN feces0.500000

Problems / suggestions? Please email info AT dbbact DOT org