Experiment ID: 13

Field Description
namespatial heterogeneity of gut microbial composition along the gastrointestinal tract in natural populations of house mice
sraerp016947
sraprjeb15238
datamd540c3c1bc42d28ba0baf43fa63e1828dd
mapmd53e764deaff3855d5bf42a0374f9c959e

Annotations for experiment:

term enrichment score
TermScore
LOWER IN esophagus0.500000
colon0.400000
LOWER IN colon0.400000
esophagus0.333333
LOWER IN caecum0.333333
gastrointestinal system0.250000
LOWER IN mouth0.222222
LOWER IN rectum0.222222
caecum0.200000
LOWER IN stomach0.181818
LOWER IN duodenum0.181818
rectum0.166667
duodenum0.166667
LOWER IN ileum0.142857
ileum0.142857
stomach0.111111
LOWER IN feces0.095238
mouth0.080000
mus musculus0.031746
united states of america0.008811
feces0.007246
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN esophagus0.500000
colon0.333333
LOWER IN colon0.333333
esophagus0.250000
LOWER IN caecum0.250000
gastrointestinal system0.142857
LOWER IN mouth0.142857
LOWER IN rectum0.142857
caecum0.125000
LOWER IN stomach0.111111
LOWER IN duodenum0.111111
rectum0.100000
duodenum0.100000
LOWER IN ileum0.083333
ileum0.083333
stomach0.062500
LOWER IN feces0.052632
mouth0.043478
mus musculus0.016129
united states of america0.004425
feces0.003650
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
united states of america1.000000
gastrointestinal system1.000000
caecum0.500000
colon0.500000
rectum0.500000
feces0.500000
LOWER IN esophagus0.500000
LOWER IN stomach0.500000
LOWER IN duodenum0.500000
LOWER IN ileum0.500000
LOWER IN mouth0.500000
esophagus0.500000
stomach0.500000
duodenum0.500000
ileum0.500000
LOWER IN caecum0.500000
LOWER IN colon0.500000
LOWER IN rectum0.500000
LOWER IN feces0.500000
mouth0.500000

Problems / suggestions? Please email info AT dbbact DOT org