Experiment ID: 13

Field Description
namespatial heterogeneity of gut microbial composition along the gastrointestinal tract in natural populations of house mice
sraerp016947
sraprjeb15238
datamd540c3c1bc42d28ba0baf43fa63e1828dd
mapmd53e764deaff3855d5bf42a0374f9c959e

Annotations for experiment:

term enrichment score
TermScore
LOWER IN esophagus0.500000
esophagus0.500000
gastrointestinal system0.400000
LOWER IN rectum0.250000
LOWER IN mouth0.222222
LOWER IN stomach0.222222
LOWER IN duodenum0.222222
LOWER IN ileum0.222222
ileum0.222222
duodenum0.200000
rectum0.181818
LOWER IN caecum0.181818
stomach0.142857
LOWER IN colon0.142857
LOWER IN feces0.125000
colon0.105263
mouth0.090909
caecum0.086957
mus musculus0.035714
united states of america0.011364
feces0.010526
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN esophagus0.500000
esophagus0.500000
gastrointestinal system0.250000
LOWER IN rectum0.166667
LOWER IN mouth0.142857
LOWER IN stomach0.142857
LOWER IN duodenum0.142857
LOWER IN ileum0.142857
ileum0.142857
duodenum0.125000
rectum0.111111
LOWER IN caecum0.111111
stomach0.083333
LOWER IN colon0.083333
LOWER IN feces0.071429
colon0.058824
mouth0.050000
caecum0.047619
mus musculus0.018182
united states of america0.005714
feces0.005319
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
united states of america1.000000
gastrointestinal system1.000000
caecum0.500000
colon0.500000
rectum0.500000
feces0.500000
LOWER IN mouth0.500000
LOWER IN esophagus0.500000
LOWER IN stomach0.500000
LOWER IN duodenum0.500000
LOWER IN ileum0.500000
mouth0.500000
esophagus0.500000
stomach0.500000
duodenum0.500000
ileum0.500000
LOWER IN caecum0.500000
LOWER IN colon0.500000
LOWER IN rectum0.500000
LOWER IN feces0.500000

Problems / suggestions? Please email info AT dbbact DOT org