dbBact

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Experiment ID: 14

Field	Description
name	mouse biopsies pilot
datamd5	5ba1cd6a9f6bdcd6fc74ab50945252a3
mapmd5	531d0fca77f9a4c453085529cd0f77bd

Annotations for experiment:

term enrichment score

Term	Score
transverse colon	0.444444
LOWER IN left colon	0.307692
right colon	0.300000
LOWER IN transverse colon	0.285714
gastrointestinal system	0.250000
left colon	0.222222
LOWER IN jejunum	0.200000
jejunum	0.200000
LOWER IN right colon	0.200000
LOWER IN stomach	0.142857
LOWER IN duodenum	0.133333
duodenum	0.125000
LOWER IN ileum	0.111111
LOWER IN caecum	0.107143
ileum	0.100000
stomach	0.095238
LOWER IN colon	0.095238
LOWER IN feces	0.076923
caecum	0.051282
mus musculus	0.031746
united states of america	0.008264
feces	0.006547

Fraction of dbbact annotations with this term covered by the query

Term	Score
transverse colon	0.500000
LOWER IN transverse colon	0.500000
left colon	0.250000
LOWER IN left colon	0.250000
right colon	0.200000
LOWER IN jejunum	0.200000
jejunum	0.200000
LOWER IN right colon	0.200000
gastrointestinal system	0.142857
LOWER IN stomach	0.111111
LOWER IN duodenum	0.100000
duodenum	0.090909
LOWER IN ileum	0.076923
ileum	0.066667
stomach	0.062500
LOWER IN colon	0.062500
LOWER IN caecum	0.058824
LOWER IN feces	0.047619
caecum	0.029412
mus musculus	0.016129
united states of america	0.004149
feces	0.003300

Fraction of annotations for the query sequences containing the term

Term	Score
mus musculus	1.000000
united states of america	1.000000
gastrointestinal system	1.000000
right colon	0.600000
LOWER IN caecum	0.600000
transverse colon	0.400000
feces	0.400000
LOWER IN left colon	0.400000
caecum	0.200000
left colon	0.200000
LOWER IN stomach	0.200000
LOWER IN duodenum	0.200000
LOWER IN jejunum	0.200000
LOWER IN ileum	0.200000
stomach	0.200000
duodenum	0.200000
jejunum	0.200000
ileum	0.200000
LOWER IN right colon	0.200000
LOWER IN transverse colon	0.200000
LOWER IN feces	0.200000
LOWER IN colon	0.200000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
14	amnon	much higher in right and transverse colon compared to other GI tract ( high in right colon transverse colon compared to left colon caecum in mus musculus united states of america gastrointestinal system )	2016-11-08	v4	No	1 / 1
14	amnon	highest in feces compared to colon ( high in feces compared to colon in mus musculus united states of america gastrointestinal system )	2016-11-08	v4	No	1 / 1
14	amnon	highest in the right colon ( high in right colon compared to caecum in mus musculus united states of america gastrointestinal system )	2016-11-08	v4	No	1 / 1
14	amnon	high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system	2016-11-08	v4	No	1 / 42
14	amnon	high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system	2016-11-08	v4	No	1 / 51

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