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Experiment ID: 14

Field	Description
name	mouse biopsies pilot
datamd5	5ba1cd6a9f6bdcd6fc74ab50945252a3
mapmd5	531d0fca77f9a4c453085529cd0f77bd

Annotations for experiment:

term enrichment score

Term	Score
transverse colon	0.444444
LOWER IN left colon	0.307692
right colon	0.300000
LOWER IN transverse colon	0.285714
gastrointestinal system	0.250000
left colon	0.222222
LOWER IN right colon	0.200000
LOWER IN jejunum	0.153846
jejunum	0.142857
LOWER IN stomach	0.133333
LOWER IN duodenum	0.117647
duodenum	0.105263
LOWER IN ileum	0.100000
LOWER IN caecum	0.096774
stomach	0.090909
LOWER IN colon	0.086957
ileum	0.083333
LOWER IN feces	0.062500
caecum	0.037037
mus musculus	0.027778
united states of america	0.007067
feces	0.005175

Fraction of dbbact annotations with this term covered by the query

Term	Score
transverse colon	0.500000
LOWER IN transverse colon	0.500000
left colon	0.250000
LOWER IN left colon	0.250000
right colon	0.200000
LOWER IN right colon	0.200000
gastrointestinal system	0.142857
LOWER IN jejunum	0.125000
jejunum	0.111111
LOWER IN stomach	0.100000
LOWER IN duodenum	0.083333
duodenum	0.071429
LOWER IN ileum	0.066667
stomach	0.058824
LOWER IN colon	0.055556
ileum	0.052632
LOWER IN caecum	0.052632
LOWER IN feces	0.037037
caecum	0.020408
mus musculus	0.014085
united states of america	0.003546
feces	0.002604

Fraction of annotations for the query sequences containing the term

Term	Score
united states of america	1.000000
gastrointestinal system	1.000000
mus musculus	1.000000
right colon	0.600000
LOWER IN caecum	0.600000
feces	0.400000
transverse colon	0.400000
LOWER IN left colon	0.400000
caecum	0.200000
left colon	0.200000
LOWER IN stomach	0.200000
LOWER IN duodenum	0.200000
LOWER IN jejunum	0.200000
LOWER IN ileum	0.200000
stomach	0.200000
duodenum	0.200000
jejunum	0.200000
ileum	0.200000
LOWER IN feces	0.200000
LOWER IN transverse colon	0.200000
LOWER IN right colon	0.200000
LOWER IN colon	0.200000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
caecum	1.000000
transverse colon	1.000000
left colon	1.000000
right colon	1.000000
LOWER IN stomach	1.000000
LOWER IN duodenum	1.000000
LOWER IN jejunum	1.000000
LOWER IN ileum	1.000000
united states of america	1.000000
gastrointestinal system	1.000000
mus musculus	1.000000
stomach	1.000000
duodenum	1.000000
jejunum	1.000000
ileum	1.000000
LOWER IN feces	1.000000
LOWER IN caecum	1.000000
LOWER IN transverse colon	1.000000
LOWER IN left colon	1.000000
LOWER IN right colon	1.000000
LOWER IN colon	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
14	amnon	highest in the right colon ( high in right colon compared to caecum in united states of america gastrointestinal system mus musculus )	2016-11-08	v4	1 / 1	approved	No
14	amnon	highest in feces compared to colon ( high in feces compared to colon in united states of america gastrointestinal system mus musculus )	2016-11-08	v4	1 / 1	approved	No
14	amnon	much higher in right and transverse colon compared to other GI tract ( high in transverse colon right colon compared to caecum left colon in united states of america gastrointestinal system mus musculus )	2016-11-08	v4	1 / 1	approved	No
14	amnon	high in stomach duodenum jejunum ileum compared to feces caecum transverse colon left colon right colon in united states of america gastrointestinal system mus musculus	2016-11-08	v4	1 / 42	approved	No
14	amnon	high in feces caecum transverse colon left colon right colon compared to stomach duodenum jejunum ileum in united states of america gastrointestinal system mus musculus	2016-11-08	v4	1 / 51	approved	No

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