Experiment ID: 171

Field Description
namedrought stress results in a compartment-specific restructuring of the rice root-associated microbiomes
srasrp106909
sraprjna386367
datamd5e101bf65181c5c0b525a08a8aa4a8380
mapmd56564deb319099f986d3fc1702c389e40

Annotations for experiment:

term enrichment score
TermScore
rice0.375000
oryza sativa0.315789
LOWER IN drought environment0.240000
drought environment0.240000
depth 5cm0.222222
flooded soil0.111111
LOWER IN flooded soil0.111111
root0.109890
LOWER IN rhizosphere0.090909
state of california0.083333
LOWER IN root0.074074
LOWER IN soil0.071429
rhizosphere0.053097
soil0.029586
LOWER IN control0.012097
control0.012024
united states of america0.008811
Fraction of dbbact annotations with this term covered by the query
TermScore
flooded soil0.500000
LOWER IN flooded soil0.500000
LOWER IN drought environment0.333333
drought environment0.333333
rice0.250000
oryza sativa0.200000
depth 5cm0.200000
LOWER IN root0.090909
LOWER IN soil0.083333
LOWER IN rhizosphere0.071429
root0.066667
state of california0.043478
rhizosphere0.028571
soil0.015152
LOWER IN control0.006250
control0.006211
united states of america0.004425
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of california1.000000
oryza sativa0.750000
rice0.750000
soil0.625000
rhizosphere0.375000
root0.312500
depth 5cm0.250000
control0.187500
LOWER IN drought environment0.187500
drought environment0.187500
LOWER IN control0.187500
LOWER IN rhizosphere0.125000
LOWER IN root0.062500
LOWER IN soil0.062500
flooded soil0.062500
LOWER IN flooded soil0.062500
Exp. ID User ID Description Date Region Flag Sequences
171amnonhigh freq. in soil with rice growth irrigation protocol (dominant soil, united states of america, state of california, depth 5cm)2017-07-25v4No1 / -7
171amnondominant soil, united states of america, state of california, rhizosphere, oryza sativa, rice2017-07-25v4No1 / -6
171amnondominant united states of america, state of california, oryza sativa, rice, root2017-07-25v4No1 / -6
171amnonhigh in draught soil compared to soil with rice growth irrigation protocol ( high in drought environment compared to control flooded soil in soil united states of america state of california depth 5cm )2017-07-25v4No1 / 3
171amnonlow in draught soil compared to soil with rice growth irrigation protocol ( high in control flooded soil compared to drought environment in soil united states of america state of california depth 5cm )2017-07-25v4No1 / 38
171amnonlower in rice rhizosphere soil compared to bulk soil (no rice) ( high in soil compared to rhizosphere in united states of america state of california oryza sativa rice )2017-07-25v4No1 / 65
171amnonhigher in rice rhizosphere soil compared to bulk soil (no rice) ( high in rhizosphere compared to soil in united states of america oryza sativa state of california rice )2017-07-25v4No1 / 132
171amnoncommon united states of america, state of california, oryza sativa, rice, root2017-07-25v4No1 / 148
171amnonhigher in roots compared to rhizosphere soil in rice ( high in root compared to rhizosphere in united states of america state of california oryza sativa rice )2017-07-25v4No1 / 205
171amnonhigher in roots of drought irrigated rice compared to irrigated conrols ( high in drought environment compared to control in united states of america state of california oryza sativa rice root )2017-07-25v4No1 / 274
171amnonlower in roots of drought irrigated rice compared to irrigated conrols ( high in control compared to drought environment in united states of america state of california oryza sativa rice root )2017-07-25v4No1 / 280
171amnon high in drought environment compared to control in soil united states of america state of california rhizosphere oryza sativa rice 2017-07-25v4No1 / 762
171amnoncommon soil, united states of america, state of california, rhizosphere, oryza sativa, rice2017-07-25v4No1 / 764
171amnoncommon in soil with rice growth irrigation protocol (common soil, united states of america, state of california, depth 5cm)2017-07-25v4No1 / 882
171amnon high in control compared to drought environment in soil united states of america state of california rhizosphere oryza sativa rice 2017-07-25v4No1 / 1156
171amnonlower in roots compared to rhizosphere soil in rice ( high in rhizosphere soil compared to root in united states of america state of california oryza sativa rice )2017-07-25v4No1 / 7620

Problems / suggestions? Please email info AT dbbact DOT org