dbBact

×

Experiment ID: 175

Field	Description
name	understanding the variation of microbial community in heavy metals contaminated soil using high throughput sequencing
sra	srp100736
sra	prjna376845
datamd5	d084c9f2c4e3b67664d6d6b25d831af6
mapmd5	814874d467168f15fe3ffbbda4148563

Annotations for experiment:

term enrichment score

Term	Score
heavy metal	0.500000
ph 7-9	0.500000
LOWER IN winter	0.105263
winter	0.095238
summer	0.076923
LOWER IN summer	0.076923
soil	0.021505
china	0.012821

Fraction of dbbact annotations with this term covered by the query

Term	Score
ph 7-9	0.500000
heavy metal	0.333333
LOWER IN winter	0.066667
winter	0.058824
summer	0.045455
LOWER IN summer	0.045455
soil	0.010870
china	0.006452

Fraction of annotations for the query sequences containing the term

Term	Score
soil	1.000000
heavy metal	1.000000
china	1.000000
ph 7-9	0.500000
summer	0.250000
LOWER IN winter	0.250000
winter	0.250000
LOWER IN summer	0.250000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
175	amnon	high freq in heavy metal contaminated soils in china (dominant soil, heavy metal, ph 7-9, china)	2017-07-29	v4	No	1 / 1
175	amnon	higher in winter compared to summer in heavy metal contaminated soils in china ( high in winter compared to summer in soil heavy metal china )	2017-07-29	v4	No	1 / 337
175	amnon	higher in summer compared to winter in heavy metal contaminated soils in china ( high in summer compared to winter in soil heavy metal china )	2017-07-29	v4	No	1 / 658
175	amnon	common in heavy metal contaminated soils in china (common soil, heavy metal, ph 7-9, china)	2017-07-29	v4	No	1 / 2133

Problems / suggestions? Please email info AT dbbact DOT org