dbBact

×

Experiment ID: 207

Field	Description
name	fecal microbial characterization of hospitalized patients with suspected infectious diarrhea shows significant dysbiosis
sra	prjeb15447
datamd5	dcbf829dc3c39bc4010e73075c43ef5d
mapmd5	981bcecc6cd1e563fe821a591b094fa9

Annotations for experiment:

term enrichment score

Term	Score
diarrhea	0.545455
LOWER IN diarrhea	0.222222
pathogen	0.129032
israel	0.123077
LOWER IN control	0.012121
control	0.012048
homo sapiens	0.008466
feces	0.007266

Fraction of dbbact annotations with this term covered by the query

Term	Score
diarrhea	0.500000
LOWER IN diarrhea	0.250000
pathogen	0.076923
israel	0.066667
LOWER IN control	0.006250
control	0.006211
homo sapiens	0.004255
feces	0.003650

Fraction of annotations for the query sequences containing the term

Term	Score
feces	0.800000
homo sapiens	0.800000
israel	0.800000
diarrhea	0.600000
pathogen	0.400000
control	0.200000
LOWER IN diarrhea	0.200000
LOWER IN control	0.200000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
207	amnon	Pathogen - campylobacter (human diarrhea) (other pathogen)	2017-10-05	v4	No	1 / -7
207	amnon	higher in people hospitalized with diarrhea compared to healthy controls ( high in diarrhea compared to control in pathogen homo sapiens israel feces )	2017-10-05	v4	No	1 / -7
207	amnon	common in people hospitalized with diarrhea (common homo sapiens, israel, feces, diarrhea)	2017-10-05	v4	No	1 / -1
207	amnon	high freq. in people hospitalized with diarrhea (dominant homo sapiens, israel, feces, diarrhea)	2017-10-05	v4	No	1 / 10
207	amnon	lower in people hospitalized with diarrhea compared to healthy controls ( high in control compared to diarrhea in feces homo sapiens israel )	2017-10-05	v4	No	1 / 39

Problems / suggestions? Please email info AT dbbact DOT org