dbBact

×

Experiment ID: 210

Field	Description
name	regulators of gut motility revealed by a gnotobiotic model of diet-microbiome interactions related to travel
sra	erp010250
sra	prjeb9169
datamd5	caec0a1f457ba6791185a410cb9a1b9c
mapmd5	e3b4f5b0f15f47e9ded1d29d56932281

Annotations for experiment:

term enrichment score

Term	Score
bangladesh diet	0.500000
humanized mouse	0.500000
LOWER IN bangladesh diet	0.500000
LOWER IN american diet	0.400000
american diet	0.400000
diet	0.058824
mouse	0.034483
mus musculus	0.031250
research facility	0.013514
feces	0.006349

Fraction of dbbact annotations with this term covered by the query

Term	Score
bangladesh diet	0.500000
LOWER IN bangladesh diet	0.500000
LOWER IN american diet	0.333333
humanized mouse	0.333333
american diet	0.333333
diet	0.030303
mouse	0.017544
mus musculus	0.015873
research facility	0.006803
feces	0.003185

Fraction of annotations for the query sequences containing the term

Term	Score
diet	1.000000
feces	1.000000
research facility	1.000000
mus musculus	1.000000
mouse	1.000000
humanized mouse	1.000000
bangladesh diet	0.500000
LOWER IN american diet	0.500000
american diet	0.500000
LOWER IN bangladesh diet	0.500000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
210	amnon	higher in american diet compared to bangladeshi diet in mice with bangladeshi human FMT ( high in diet american diet compared to bangladesh diet in feces research facility mus musculus mouse humanized mouse )	2017-10-21	v4	No	1 / 4
210	amnon	higher in bangladeshi diet compared to american diet in mice with american human FMT ( high in diet bangladesh diet compared to american diet in feces research facility mus musculus mouse humanized mouse )	2017-10-21	v4	No	1 / 13

Problems / suggestions? Please email info AT dbbact DOT org