dbBact

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Experiment ID: 213

Field	Description
name	microbial composition predicts genital tract inflammation and persistent bacterial vaginosis in adolescent south african women
sra	erp017263
sra	prjeb15497
datamd5	be00de6a9d82c847811764b7cb7708b9
mapmd5	e9463e5cf696c2ec45dd677f7f021225

Annotations for experiment:

term enrichment score

Term	Score
LOWER IN bacterial vaginosis	0.333333
bacterial vaginosis	0.333333
vagina	0.166667
south africa	0.133333
control	0.010582
LOWER IN control	0.010582
homo sapiens	0.007353

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN bacterial vaginosis	0.500000
bacterial vaginosis	0.500000
vagina	0.090909
south africa	0.071429
control	0.005405
LOWER IN control	0.005405
homo sapiens	0.003690

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
vagina	1.000000
south africa	1.000000
control	0.250000
LOWER IN bacterial vaginosis	0.250000
bacterial vaginosis	0.250000
LOWER IN control	0.250000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
213	amnon	dominant homo sapiens, vagina, south africa	2017-10-22	v4	No	1 / 16
213	amnon	higher in patients with bacterial vaginosis compared to healthy controls ( high in bacterial vaginosis compared to control in homo sapiens vagina south africa )	2017-10-31	v4	No	1 / 38
213	amnon	common homo sapiens, vagina, south africa	2017-10-22	v4	No	1 / 103
213	amnon	lower in patients with bacterial vaginosis compared to healthy controls ( high in control compared to bacterial vaginosis in homo sapiens vagina south africa )	2017-10-31	v4	No	1 / 107

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