Experiment ID: 214

Field Description
nameinteractions between gut microbiota, host genetics and diet in the development of metabolic syndrome
sraerp010838
sraprjeb9702
datamd566087ba7baad7a121a4df88d5d5ddf94
mapmd579aea80c522c27daffb0f889acb26896

Annotations for experiment:

term enrichment score
TermScore
strain 129s0.466667
jackson laboratories0.217391
c57bl/6j0.157895
high fat diet0.140000
mouse chow0.115702
LOWER IN c57bl/6j0.111111
nih 31m chow0.111111
LOWER IN nih 31m chow0.111111
LOWER IN strain 129s0.111111
strain s1290.111111
LOWER IN strain s1290.111111
taconic farms0.100000
LOWER IN taconic farms0.100000
LOWER IN jackson laboratories0.090909
LOWER IN high fat diet0.071429
LOWER IN mouse chow0.064516
diet0.048780
mouse0.034483
mus musculus0.031250
research facility0.013514
united states of america0.008065
feces0.006349
Fraction of dbbact annotations with this term covered by the query
TermScore
nih 31m chow0.500000
LOWER IN nih 31m chow0.500000
strain 129s0.500000
LOWER IN strain 129s0.500000
strain s1290.500000
LOWER IN strain s1290.500000
taconic farms0.250000
LOWER IN taconic farms0.250000
LOWER IN jackson laboratories0.166667
jackson laboratories0.166667
LOWER IN c57bl/6j0.100000
c57bl/6j0.100000
LOWER IN high fat diet0.083333
high fat diet0.083333
mouse chow0.066667
LOWER IN mouse chow0.066667
diet0.030303
mouse0.017544
mus musculus0.015873
research facility0.006803
united states of america0.004049
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
research facility1.000000
mus musculus1.000000
mouse1.000000
mouse chow0.437500
high fat diet0.437500
strain 129s0.437500
c57bl/6j0.375000
jackson laboratories0.312500
diet0.125000
LOWER IN c57bl/6j0.125000
nih 31m chow0.062500
LOWER IN high fat diet0.062500
LOWER IN mouse chow0.062500
LOWER IN nih 31m chow0.062500
taconic farms0.062500
LOWER IN jackson laboratories0.062500
LOWER IN taconic farms0.062500
LOWER IN strain 129s0.062500
strain s1290.062500
LOWER IN strain s1290.062500
Exp. ID User ID Description Date Region Flag Sequences
214amnondominant feces, united states of america, research facility, mus musculus, mouse, mouse chow, strain 129s2017-10-23v4No1 / 13
214amnondominant feces, united states of america, research facility, mus musculus, c57bl/6j, mouse, mouse chow2017-10-23v4No1 / 14
214amnondominant feces, united states of america, research facility, mus musculus, c57bl/6j, high fat diet, mouse2017-10-23v4No1 / 16
214amnondominant feces, united states of america, research facility, mus musculus, high fat diet, mouse, strain 129s2017-10-23v4No1 / 18
214amnoncommon feces, united states of america, research facility, mus musculus, c57bl/6j, mouse, mouse chow2017-10-23v4No1 / 60
214amnoncommon feces, united states of america, research facility, mus musculus, c57bl/6j, high fat diet, mouse2017-10-23v4No1 / 62
214amnoncommon feces, united states of america, research facility, mus musculus, high fat diet, mouse, strain 129s2017-10-23v4No1 / 89
214amnoncommon feces, united states of america, research facility, mus musculus, mouse, mouse chow, strain 129s2017-10-23v4No1 / 95
214amnon high in c57bl/6j compared to strain s129 in feces united states of america research facility mus musculus high fat diet mouse jackson laboratories 2017-10-23v4No1 / 113
214amnon high in strain s129 compared to c57bl/6j in feces united states of america research facility mus musculus high fat diet mouse jackson laboratories 2017-10-23v4No1 / 148
214amnon high in c57bl/6j compared to strain 129s in feces united states of america research facility mus musculus mouse mouse chow jackson laboratories 2017-10-23v4No1 / 154
214amnonhigher in mice from jackson laboratories compared to taconic farms ( high in jackson laboratories compared to taconic farms in feces united states of america research facility mus musculus mouse strain 129s )2017-10-23v4No1 / 181
214amnon high in strain 129s compared to c57bl/6j in feces united states of america research facility mus musculus mouse mouse chow jackson laboratories 2017-10-23v4No1 / 207
214amnonlower in mice from jackson laboratories compared to taconic farms ( high in taconic farms compared to jackson laboratories in feces united states of america research facility mus musculus mouse strain 129s )2017-10-23v4No1 / 232
214amnon high in diet high fat diet compared to mouse chow nih 31m chow in feces united states of america research facility mus musculus mouse 2017-10-23v4No1 / 255
214amnon high in diet mouse chow nih 31m chow compared to high fat diet in feces united states of america research facility mus musculus mouse 2017-10-23v4No1 / 495

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