Experiment ID: 219

Field Description
namemodeling environmental risk factors of autism in mice induces ibd-related gut microbial dysbiosis and hyperserotonemia
sraerp016282
sraprjeb14629
datamd5b257e2a4bb11654c163deb54be79bb79
mapmd555cca705d46030f544905550d6af0775

Annotations for experiment:

term enrichment score
TermScore
south korea0.400000
autism spectrum disorder0.333333
LOWER IN autism spectrum disorder0.333333
age 28 days0.200000
LOWER IN age 21 days0.200000
LOWER IN pre-weaning0.200000
post-weaning0.200000
valproic acid0.200000
LOWER IN age 28 days0.200000
poly ic0.200000
LOWER IN poly ic0.200000
LOWER IN valproic acid0.200000
age 21 days0.181818
c57bl/60.153846
breast milk0.153846
LOWER IN mouse chow0.111111
male0.103448
age0.086957
female0.060606
mouse0.044444
mus musculus0.038462
research facility0.021978
LOWER IN control0.018692
control0.018349
feces0.011628
Fraction of dbbact annotations with this term covered by the query
TermScore
age 28 days0.500000
LOWER IN age 21 days0.500000
LOWER IN pre-weaning0.500000
post-weaning0.500000
valproic acid0.500000
autism spectrum disorder0.500000
LOWER IN age 28 days0.500000
poly ic0.500000
LOWER IN autism spectrum disorder0.500000
LOWER IN poly ic0.500000
LOWER IN valproic acid0.500000
age 21 days0.333333
south korea0.250000
breast milk0.200000
LOWER IN mouse chow0.100000
c57bl/60.083333
male0.055556
age0.052632
female0.034483
mouse0.022727
mus musculus0.019608
research facility0.011111
LOWER IN control0.009709
control0.009524
feces0.005848
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
c57bl/61.000000
research facility1.000000
south korea1.000000
male0.750000
age0.250000
female0.250000
autism spectrum disorder0.250000
LOWER IN control0.250000
control0.250000
LOWER IN autism spectrum disorder0.250000
age 28 days0.125000
LOWER IN age 21 days0.125000
LOWER IN pre-weaning0.125000
post-weaning0.125000
valproic acid0.125000
age 21 days0.125000
LOWER IN age 28 days0.125000
breast milk0.125000
LOWER IN mouse chow0.125000
poly ic0.125000
LOWER IN poly ic0.125000
LOWER IN valproic acid0.125000
Exp. ID User ID Description Date Sequences
219amnonhigher in controls compared to ASD mice (following mother VPA treatment) ( high in control compared to autism spectrum disorder valproic acid in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-241 / 15
219amnonhigh freq. in mother mice feces (highfreq mus musculus, mouse, feces, c57bl/6, research facility, south korea, female)2017-10-241 / 22
219amnonhigher in controls compared toASD mice (following mother poly IC treatment) ( high in control compared to autism spectrum disorder poly ic in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-241 / 31
219amnonhigher in pre-weaning compared to post-weaning in mouse feces ( high in age age 21 days breast milk compared to age 28 days mouse chow in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-241 / 36
219amnonlower in controls compared to ASD mice (following mother poly IC treatment) ( high in autism spectrum disorder poly ic compared to control in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-241 / 36
219amnonlower in controls compared to ASD mice (following mother VPA treatment) ( high in valproic acid autism spectrum disorder compared to control in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-241 / 37
219amnoncommon in mother mice feces (common mus musculus, mouse, feces, c57bl/6, research facility, south korea, female)2017-10-241 / 250
219amnonlower in pre-weaning compared to post-weaning in mouse feces ( high in age age 28 days post-weaning compared to age 21 days pre-weaning in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-241 / 299

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