Experiment ID: 219

Field Description
namemodeling environmental risk factors of autism in mice induces ibd-related gut microbial dysbiosis and hyperserotonemia
sraerp016282
sraprjeb14629
datamd5b257e2a4bb11654c163deb54be79bb79
mapmd555cca705d46030f544905550d6af0775

Annotations for experiment:

term enrichment score
TermScore
autism spectrum disorder0.333333
LOWER IN autism spectrum disorder0.333333
age 28 days0.200000
LOWER IN pre-weaning0.200000
valproic acid0.200000
poly ic0.200000
LOWER IN age 28 days0.200000
LOWER IN poly ic0.200000
LOWER IN valproic acid0.200000
post-weaning0.181818
LOWER IN age 21 days0.181818
age 21 days0.181818
south korea0.153846
breast milk0.133333
c57bl/60.105263
LOWER IN mouse chow0.086957
age0.080000
male0.058252
mouse0.034483
mus musculus0.031250
female0.029851
research facility0.013514
LOWER IN control0.010582
control0.010582
feces0.006349
Fraction of dbbact annotations with this term covered by the query
TermScore
age 28 days0.500000
LOWER IN pre-weaning0.500000
valproic acid0.500000
autism spectrum disorder0.500000
poly ic0.500000
LOWER IN age 28 days0.500000
LOWER IN poly ic0.500000
LOWER IN autism spectrum disorder0.500000
LOWER IN valproic acid0.500000
post-weaning0.333333
LOWER IN age 21 days0.333333
age 21 days0.333333
breast milk0.142857
south korea0.083333
LOWER IN mouse chow0.066667
c57bl/60.055556
age0.047619
male0.030303
mouse0.017544
mus musculus0.015873
female0.015873
research facility0.006803
LOWER IN control0.005405
control0.005405
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
research facility1.000000
mus musculus1.000000
c57bl/61.000000
mouse1.000000
south korea1.000000
male0.750000
age0.250000
female0.250000
autism spectrum disorder0.250000
LOWER IN control0.250000
control0.250000
LOWER IN autism spectrum disorder0.250000
age 28 days0.125000
post-weaning0.125000
LOWER IN age 21 days0.125000
LOWER IN pre-weaning0.125000
valproic acid0.125000
poly ic0.125000
breast milk0.125000
age 21 days0.125000
LOWER IN mouse chow0.125000
LOWER IN age 28 days0.125000
LOWER IN poly ic0.125000
LOWER IN valproic acid0.125000
Exp. ID User ID Description Date Region Flag Sequences
219amnonhigher in controls compared to ASD mice (following mother VPA treatment) ( high in control compared to valproic acid autism spectrum disorder in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v4No1 / 15
219amnonhigh freq. in mother mice feces (dominant feces, female, research facility, mus musculus, c57bl/6, mouse, south korea)2017-10-24v4No1 / 22
219amnonhigher in controls compared toASD mice (following mother poly IC treatment) ( high in control compared to poly ic autism spectrum disorder in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v4No1 / 31
219amnonlower in controls compared to ASD mice (following mother poly IC treatment) ( high in poly ic autism spectrum disorder compared to control in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v4No1 / 36
219amnonhigher in pre-weaning compared to post-weaning in mouse feces ( high in breast milk age age 21 days compared to mouse chow age 28 days in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v4No1 / 36
219amnonlower in controls compared to ASD mice (following mother VPA treatment) ( high in valproic acid autism spectrum disorder compared to control in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v4No1 / 37
219amnoncommon in mother mice feces (common feces, female, research facility, mus musculus, c57bl/6, mouse, south korea)2017-10-24v4No1 / 250
219amnonlower in pre-weaning compared to post-weaning in mouse feces ( high in age age 28 days post-weaning compared to age 21 days pre-weaning in feces research facility mus musculus c57bl/6 male mouse south korea )2017-10-24v4No1 / 299

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