Experiment ID: 220

Field Description
namedietary perturbations alter the ecological significance of ingested lactobacillus plantarum in the digestive tract
sra srp057487
datamd5c7fbcd014736fece699a2a04d38281b2
mapmd5c289b3c68a9b62118ff76fa03e8d5b04

Annotations for experiment:

term enrichment score
TermScore
low fat diet0.428571
balb/c0.222222
LOWER IN low fat diet0.200000
lactobacillus plantarum0.200000
LOWER IN probiotics0.200000
LOWER IN lactobacillus plantarum0.200000
probiotics0.181818
mouse chow0.157895
high fat diet0.146341
LOWER IN high fat diet0.111111
LOWER IN mouse chow0.100000
diet0.083333
female0.064516
mouse0.040816
mus musculus0.035714
research facility0.021053
LOWER IN control0.016667
control0.016529
united states of america0.011364
feces0.010582
Fraction of dbbact annotations with this term covered by the query
TermScore
low fat diet0.500000
LOWER IN low fat diet0.500000
lactobacillus plantarum0.500000
LOWER IN probiotics0.500000
LOWER IN lactobacillus plantarum0.500000
probiotics0.333333
balb/c0.125000
mouse chow0.100000
LOWER IN high fat diet0.100000
high fat diet0.090909
LOWER IN mouse chow0.083333
diet0.043478
female0.033333
mouse0.020833
mus musculus0.018182
research facility0.010638
LOWER IN control0.008929
control0.008850
united states of america0.005714
feces0.005319
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
research facility1.000000
united states of america1.000000
female1.000000
balb/c1.000000
diet1.000000
mouse chow0.375000
low fat diet0.375000
high fat diet0.375000
LOWER IN mouse chow0.125000
LOWER IN low fat diet0.125000
LOWER IN high fat diet0.125000
probiotics0.125000
lactobacillus plantarum0.125000
LOWER IN control0.125000
control0.125000
LOWER IN probiotics0.125000
LOWER IN lactobacillus plantarum0.125000

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