Experiment ID: 220

Field Description
namedietary perturbations alter the ecological significance of ingested lactobacillus plantarum in the digestive tract
sra srp057487
datamd5c7fbcd014736fece699a2a04d38281b2
mapmd5c289b3c68a9b62118ff76fa03e8d5b04

Annotations for experiment:

term enrichment score
TermScore
low fat diet0.352941
balb/c0.222222
lactobacillus plantarum0.200000
LOWER IN lactobacillus plantarum0.200000
LOWER IN low fat diet0.181818
probiotics0.166667
LOWER IN probiotics0.166667
high fat diet0.136364
mouse chow0.113208
LOWER IN high fat diet0.100000
LOWER IN mouse chow0.086957
diet0.058824
mouse0.034483
female0.031250
mus musculus0.031250
research facility0.013514
LOWER IN control0.010363
control0.010363
united states of america0.008065
feces0.006349
Fraction of dbbact annotations with this term covered by the query
TermScore
lactobacillus plantarum0.500000
LOWER IN lactobacillus plantarum0.500000
low fat diet0.333333
LOWER IN low fat diet0.333333
probiotics0.250000
LOWER IN probiotics0.250000
balb/c0.125000
high fat diet0.083333
LOWER IN high fat diet0.083333
mouse chow0.066667
LOWER IN mouse chow0.066667
diet0.030303
mouse0.017544
female0.015873
mus musculus0.015873
research facility0.006803
LOWER IN control0.005405
control0.005405
united states of america0.004049
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
female1.000000
research facility1.000000
mus musculus1.000000
balb/c1.000000
diet1.000000
mouse1.000000
low fat diet0.375000
mouse chow0.375000
high fat diet0.375000
LOWER IN low fat diet0.125000
LOWER IN mouse chow0.125000
LOWER IN high fat diet0.125000
lactobacillus plantarum0.125000
probiotics0.125000
LOWER IN control0.125000
control0.125000
LOWER IN lactobacillus plantarum0.125000
LOWER IN probiotics0.125000
Exp. ID User ID Description Date Region Flag Sequences
220amnonlower in mice supplemented with lactobacillus plantarum probiotics ( high in control diet compared to lactobacillus plantarum probiotics in feces united states of america female research facility mus musculus balb/c mouse )2017-10-24v4No1 / 7
220amnonhigher in mice supplemented with lactobacillus plantarum probiotics ( high in diet lactobacillus plantarum probiotics compared to control in feces united states of america female research facility mus musculus balb/c mouse )2017-10-24v4No1 / 13
220amnondominant feces, united states of america, female, research facility, mus musculus, balb/c, diet, high fat diet, mouse2017-10-24v4No1 / 14
220amnondominant feces, united states of america, female, research facility, mus musculus, balb/c, diet, low fat diet, mouse, mouse chow2017-10-24v4No1 / 18
220amnon high in diet low fat diet mouse chow compared to high fat diet in feces united states of america female research facility mus musculus balb/c mouse 2017-10-24v4No1 / 113
220amnon high in diet high fat diet compared to low fat diet mouse chow in feces united states of america female research facility mus musculus balb/c mouse 2017-10-24v4No1 / 154
220amnoncommon feces, united states of america, female, research facility, mus musculus, balb/c, diet, high fat diet, mouse2017-10-24v4No1 / 241
220amnoncommon feces, united states of america, female, research facility, mus musculus, balb/c, diet, low fat diet, mouse, mouse chow2017-10-24v4No1 / 262

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