Experiment ID: 220

Field Description
namedietary perturbations alter the ecological significance of ingested lactobacillus plantarum in the digestive tract
sra srp057487
datamd5c7fbcd014736fece699a2a04d38281b2
mapmd5c289b3c68a9b62118ff76fa03e8d5b04

Annotations for experiment:

term enrichment score
TermScore
low fat diet0.428571
balb/c0.250000
LOWER IN low fat diet0.200000
lactobacillus plantarum0.200000
LOWER IN probiotics0.200000
LOWER IN lactobacillus plantarum0.200000
mouse chow0.187500
probiotics0.181818
high fat diet0.171429
LOWER IN high fat diet0.125000
LOWER IN mouse chow0.111111
diet0.095238
female0.066667
mouse0.044444
mus musculus0.038462
research facility0.021978
LOWER IN control0.018018
control0.017699
united states of america0.012346
feces0.011628
Fraction of dbbact annotations with this term covered by the query
TermScore
low fat diet0.500000
LOWER IN low fat diet0.500000
lactobacillus plantarum0.500000
LOWER IN probiotics0.500000
LOWER IN lactobacillus plantarum0.500000
probiotics0.333333
balb/c0.142857
mouse chow0.125000
LOWER IN high fat diet0.125000
high fat diet0.111111
LOWER IN mouse chow0.100000
diet0.050000
female0.034483
mouse0.022727
mus musculus0.019608
research facility0.011111
LOWER IN control0.009709
control0.009524
united states of america0.006211
feces0.005848
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
research facility1.000000
united states of america1.000000
female1.000000
balb/c1.000000
diet1.000000
mouse chow0.375000
low fat diet0.375000
high fat diet0.375000
LOWER IN mouse chow0.125000
LOWER IN low fat diet0.125000
LOWER IN high fat diet0.125000
probiotics0.125000
lactobacillus plantarum0.125000
LOWER IN control0.125000
control0.125000
LOWER IN probiotics0.125000
LOWER IN lactobacillus plantarum0.125000

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