Experiment ID: 220

Field Description
namedietary perturbations alter the ecological significance of ingested lactobacillus plantarum in the digestive tract
sra srp057487
datamd5c7fbcd014736fece699a2a04d38281b2
mapmd5c289b3c68a9b62118ff76fa03e8d5b04

Annotations for experiment:

term enrichment score
TermScore
low fat diet0.352941
balb/c0.222222
lactobacillus plantarum0.200000
LOWER IN probiotics0.200000
LOWER IN lactobacillus plantarum0.200000
LOWER IN low fat diet0.181818
probiotics0.181818
mouse chow0.146341
high fat diet0.136364
LOWER IN high fat diet0.105263
LOWER IN mouse chow0.095238
diet0.080000
female0.040000
mouse0.037736
mus musculus0.033333
research facility0.017094
LOWER IN control0.012739
control0.012658
united states of america0.009259
feces0.007843
Fraction of dbbact annotations with this term covered by the query
TermScore
lactobacillus plantarum0.500000
LOWER IN probiotics0.500000
LOWER IN lactobacillus plantarum0.500000
low fat diet0.333333
LOWER IN low fat diet0.333333
probiotics0.333333
balb/c0.125000
mouse chow0.090909
LOWER IN high fat diet0.090909
high fat diet0.083333
LOWER IN mouse chow0.076923
diet0.041667
female0.020408
mouse0.019231
mus musculus0.016949
research facility0.008621
LOWER IN control0.006711
control0.006667
united states of america0.004651
feces0.003937
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
research facility1.000000
united states of america1.000000
female1.000000
balb/c1.000000
diet1.000000
mouse chow0.375000
low fat diet0.375000
high fat diet0.375000
LOWER IN mouse chow0.125000
LOWER IN low fat diet0.125000
LOWER IN high fat diet0.125000
probiotics0.125000
lactobacillus plantarum0.125000
LOWER IN control0.125000
control0.125000
LOWER IN probiotics0.125000
LOWER IN lactobacillus plantarum0.125000
Exp. ID User ID Description Date Region Flag Sequences
220amnonlower in mice supplemented with lactobacillus plantarum probiotics ( high in control diet compared to probiotics lactobacillus plantarum in mus musculus mouse feces research facility united states of america female balb/c )2017-10-24v4No1 / 6
220amnonhigher in mice supplemented with lactobacillus plantarum probiotics ( high in probiotics diet lactobacillus plantarum compared to control in mus musculus mouse feces research facility united states of america female balb/c )2017-10-24v4No1 / 12
220amnondominant mus musculus, mouse, feces, research facility, united states of america, female, balb/c, high fat diet, diet2017-10-24v4No1 / 13
220amnondominant mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-24v4No1 / 17
220amnon high in diet low fat diet mouse chow compared to high fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-24v4No1 / 112
220amnon high in diet high fat diet compared to mouse chow low fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-24v4No1 / 153
220amnoncommon feces, united states of america, female, research facility, mus musculus, balb/c, high fat diet, mouse, diet2017-10-24v4No1 / 240
220amnoncommon mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-24v4No1 / 261

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