Experiment ID: 220

Field Description
namedietary perturbations alter the ecological significance of ingested lactobacillus plantarum in the digestive tract
sra srp057487
datamd5c7fbcd014736fece699a2a04d38281b2
mapmd5c289b3c68a9b62118ff76fa03e8d5b04

Annotations for experiment:

term enrichment score
TermScore
low fat diet0.428571
balb/c0.222222
LOWER IN low fat diet0.200000
lactobacillus plantarum0.200000
LOWER IN probiotics0.200000
LOWER IN lactobacillus plantarum0.200000
probiotics0.181818
mouse chow0.157895
high fat diet0.146341
LOWER IN high fat diet0.111111
LOWER IN mouse chow0.100000
diet0.080000
female0.058824
mouse0.040000
mus musculus0.035088
research facility0.020408
LOWER IN control0.015748
control0.015625
united states of america0.010753
feces0.010000
Fraction of dbbact annotations with this term covered by the query
TermScore
low fat diet0.500000
LOWER IN low fat diet0.500000
lactobacillus plantarum0.500000
LOWER IN probiotics0.500000
LOWER IN lactobacillus plantarum0.500000
probiotics0.333333
balb/c0.125000
mouse chow0.100000
LOWER IN high fat diet0.100000
high fat diet0.090909
LOWER IN mouse chow0.083333
diet0.041667
female0.030303
mouse0.020408
mus musculus0.017857
research facility0.010309
LOWER IN control0.008403
control0.008333
united states of america0.005405
feces0.005025
Fraction of annotations for the query sequences containing the term
TermScore
mus musculus1.000000
mouse1.000000
feces1.000000
research facility1.000000
united states of america1.000000
female1.000000
balb/c1.000000
diet1.000000
mouse chow0.375000
low fat diet0.375000
high fat diet0.375000
LOWER IN mouse chow0.125000
LOWER IN low fat diet0.125000
LOWER IN high fat diet0.125000
probiotics0.125000
lactobacillus plantarum0.125000
LOWER IN control0.125000
control0.125000
LOWER IN probiotics0.125000
LOWER IN lactobacillus plantarum0.125000
Exp. ID User ID Description Date Region Flag Sequences
220amnonlower in mice supplemented with lactobacillus plantarum probiotics ( high in control diet compared to probiotics lactobacillus plantarum in mus musculus mouse feces research facility united states of america female balb/c )2017-10-24v4No1 / 7
220amnonhigher in mice supplemented with lactobacillus plantarum probiotics ( high in probiotics diet lactobacillus plantarum compared to control in mus musculus mouse feces research facility united states of america female balb/c )2017-10-24v4No1 / 13
220amnonhighfreq mus musculus, mouse, feces, research facility, united states of america, female, balb/c, high fat diet, diet2017-10-24v4No1 / 14
220amnonhighfreq mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-24v4No1 / 18
220amnon high in diet low fat diet mouse chow compared to high fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-24v4No1 / 113
220amnon high in diet high fat diet compared to mouse chow low fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-24v4No1 / 154
220amnoncommon feces, united states of america, female, research facility, mus musculus, balb/c, high fat diet, mouse, diet2017-10-24v4No1 / 241
220amnoncommon mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-24v4No1 / 262

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