Experiment ID: 227

Field Description
namematuration of the infant respiratory microbiota, environmental drivers and health consequences: a prospective cohort study
srasrp093519
datamd5625e4b11944dabb469ad9b7bb7721590
mapmd552bdff502f6a343347540ce5c75d133b

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
age <=24 hours0.500000
LOWER IN age &gt;= 7 days0.500000
formula fed0.500000
LOWER IN breast fed0.500000
age <= 24 hours0.500000
age > 3 months0.500000
LOWER IN age &lt; 3 months0.500000
age 24 hours0.500000
LOWER IN age 2 hours0.500000
LOWER IN age &gt;=7 days0.500000
age 1 month0.500000
LOWER IN age &gt; 1 month0.500000
LOWER IN age &lt; 1 month0.500000
LOWER IN breast milk0.333333
respiratory system disease0.333333
LOWER IN age &gt; 3 months0.333333
LOWER IN respiratory system disease0.333333
kingdom of the netherlands0.250000
age 3 months0.250000
age 1 year0.142857
nasal cavity0.111111
nasopharynx0.100000
infant0.052632
age0.052632
diet0.041667
LOWER IN control0.007143
control0.007092
homo sapiens0.005525
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
nasopharynx1.000000
nasal cavity1.000000
infant1.000000
kingdom of the netherlands1.000000
age0.785714
age 3 months0.214286
age <= 24 hours0.142857
LOWER IN age &lt; 3 months0.142857
age 1 year0.142857
age <=24 hours0.071429
LOWER IN age &gt;= 7 days0.071429
formula fed0.071429
LOWER IN breast fed0.071429
LOWER IN breast milk0.071429
diet0.071429
age > 3 months0.071429
age 24 hours0.071429
LOWER IN age 2 hours0.071429
LOWER IN age &gt;=7 days0.071429
LOWER IN control0.071429
respiratory system disease0.071429
age 1 month0.071429
LOWER IN age &gt; 1 month0.071429
LOWER IN age &lt; 1 month0.071429
LOWER IN age &gt; 3 months0.071429
control0.071429
LOWER IN respiratory system disease0.071429
Exp. ID User ID Description Date Region Flag Sequences
227amnonpeaks at age 1 month in baby nasopharynx ( high in age age 1 month compared to age > 1 month age < 1 month in homo sapiens nasopharynx nasal cavity infant kingdom of the netherlands )2017-10-30v4No1 / 2
227amnonpeaks at age 3 months in baby nasopharynx ( high in age age 3 months compared to age > 3 months age < 3 months in homo sapiens nasopharynx nasal cavity infant kingdom of the netherlands )2017-10-30v4No1 / 2
227amnonlower in infants with respiratory illness compared to healthy controls ( high in control compared to respiratory system disease in kingdom of the netherlands infant nasopharynx nasal cavity homo sapiens )2017-10-30v4No1 / 2
227amnonpeaks at 24hrs compared to 2hrs or later timepoints in baby nasopharynx ( high in age age 24 hours compared to age 2 hours age >=7 days in homo sapiens nasopharynx nasal cavity infant kingdom of the netherlands )2017-10-30v4No1 / 6
227amnonhigher in infants with respiratory illness compared to healthy controls ( high in respiratory system disease compared to control in kingdom of the netherlands infant nasopharynx nasal cavity homo sapiens )2017-10-30v4No1 / 6
227amnoncommon in baby nasopharynx age 1 day to 3 months (common homo sapiens, nasopharynx, nasal cavity, infant, kingdom of the netherlands, age, age 3 months)2017-10-30v4No1 / 9
227amnonhigh freq. in baby nasopharynx age 6 months to 1 year (dominant homo sapiens, nasopharynx, nasal cavity, infant, kingdom of the netherlands, age, age 1 year)2017-10-30v4No1 / 10
227amnoncommon in baby nasopharynx age 6 months to 1 year (common homo sapiens, nasal cavity, nasopharynx, age, infant, kingdom of the netherlands, age 1 year)2017-10-30v4No1 / 10
227amnonhigh freq. in baby nasopharynx age 1 day to 3 months (dominant homo sapiens, nasopharynx, nasal cavity, infant, kingdom of the netherlands, age, age 3 months)2017-10-30v4No1 / 12
227amnonhigher in age > 3 months in baby nasopharynx ( high in age age > 3 months compared to age < 3 months in homo sapiens nasopharynx nasal cavity infant kingdom of the netherlands )2017-10-30v4No1 / 15
227amnonhigh freq. in baby nasopharynx age <= 1 day (dominant homo sapiens, nasal cavity, nasopharynx, age, infant, kingdom of the netherlands, age <= 24 hours)2017-10-30v4No1 / 17
227amnoncommon in baby nasopharynx age <= 1 day (common homo sapiens, nasal cavity, nasopharynx, age, infant, kingdom of the netherlands, age <= 24 hours)2017-10-30v4No1 / 20
227amnonhigher in nasopharynx of formula fed babies compared to breast fed ( high in formula fed diet compared to breast fed breast milk in homo sapiens kingdom of the netherlands nasopharynx nasal cavity infant )2017-11-03v4No1 / 38
227amnonhiger in first 24hrs compared to later timepoints in baby nasopharynx ( high in age age <=24 hours compared to age >= 7 days in homo sapiens nasopharynx nasal cavity infant kingdom of the netherlands )2017-10-30v4No1 / 85

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