Experiment ID: 232

Field Description
namea longitudinal study of the diabetic skin and wound microbiome
sraerp019566
sraprjeb17696
datamd504d6fdc2833a66af8b43f85fc1030367
mapmd5037c7ea2858d538ee2c1d0e6f6fba017

Annotations for experiment:

term enrichment score
TermScore
foot0.500000
diabetes mellitus0.451613
wound0.375000
ulcer0.375000
LOWER IN wound0.166667
LOWER IN ulcer0.166667
LOWER IN diabetes mellitus0.153846
australia0.133333
skin0.083333
LOWER IN control0.017094
control0.016949
homo sapiens0.013986
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN wound0.500000
LOWER IN ulcer0.500000
wound0.500000
ulcer0.500000
foot0.333333
diabetes mellitus0.333333
LOWER IN diabetes mellitus0.333333
australia0.071429
skin0.043478
LOWER IN control0.008929
control0.008850
homo sapiens0.007042
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
skin1.000000
australia1.000000
foot1.000000
diabetes mellitus0.700000
wound0.300000
ulcer0.300000
control0.200000
LOWER IN control0.200000
LOWER IN wound0.100000
LOWER IN ulcer0.100000
LOWER IN diabetes mellitus0.100000
Exp. ID User ID Description Date Sequences
232amnonhigh freq. in foot of diabetic patients (highfreq homo sapiens, skin, australia, foot, diabetes mellitus)2017-11-051 / 8
232amnonhigh freq. in foot of healthy controls (highfreq homo sapiens, skin, australia, foot)2017-11-051 / 8
232amnonhigher in diabetec foot ulcers compared to non-ulcer skin in diabetic patients ( high in ulcer wound compared to control in homo sapiens skin australia foot diabetes mellitus )2017-11-051 / 13
232amnonhigh freq. in foot ulcer of diabetic patients (highfreq homo sapiens, skin, australia, foot, diabetes mellitus, wound, ulcer)2017-11-051 / 14
232amnoncommon in foot ulcer of diabetic patients (common homo sapiens, skin, australia, foot, diabetes mellitus, wound, ulcer)2017-11-051 / 14
232amnonhigher in diabetec patient foot skin compared to healthy controls ( high in diabetes mellitus compared to control in homo sapiens skin australia foot )2017-11-051 / 19
232amnoncommon in foot of diabetic patients (common homo sapiens, skin, australia, foot, diabetes mellitus)2017-11-051 / 37
232amnoncoomon in foot of healthy controls (common homo sapiens, skin, australia, foot)2017-11-051 / 166
232amnonlower in diabetec patient foot skin compared to healthy controls ( high in control compared to diabetes mellitus in homo sapiens skin australia foot )2017-11-051 / 708
232amnonlower in diabetec foot ulcers compared to non-ulcer skin in diabetic patients ( high in control compared to wound ulcer in homo sapiens skin australia foot diabetes mellitus )2017-11-051 / 836

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