Experiment ID: 236

Field Description
namemicrobial communities in sediment from zostera marina patches, but not the z. marina leaf or root microbiomes, vary in relation to distance from patch edge
srasrp092613
sra prjna350006
datamd572a0eece46b507bd69c9ac15fe5f71f8
mapmd50636a968d92e9f19193f329386bfddc2

Annotations for experiment:

term enrichment score
TermScore
bodega bay0.648649
zostera marina0.478261
marine eelgrass0.478261
ocean0.117073
marine sediment0.093750
leaf0.082192
mitochondrion0.076923
state of california0.073846
LOWER IN marine sediment0.066667
pacific ocean0.063492
LOWER IN leaf0.060606
sediment0.055046
sea water0.048193
LOWER IN sediment0.044444
water0.032520
root0.002902
LOWER IN root0.002888
Fraction of dbbact annotations with this term covered by the query
TermScore
bodega bay0.500000
zostera marina0.333333
marine eelgrass0.333333
mitochondrion0.076923
ocean0.062500
marine sediment0.058824
LOWER IN marine sediment0.058824
LOWER IN leaf0.050000
leaf0.050000
pacific ocean0.040000
state of california0.038462
sediment0.031250
LOWER IN sediment0.031250
sea water0.028571
water0.018182
LOWER IN root0.001458
root0.001458
Fraction of annotations for the query sequences containing the term
TermScore
ocean0.923077
state of california0.923077
bodega bay0.923077
zostera marina0.846154
marine eelgrass0.846154
root0.307692
sediment0.230769
marine sediment0.230769
leaf0.230769
LOWER IN root0.153846
water0.153846
sea water0.153846
pacific ocean0.153846
LOWER IN leaf0.076923
LOWER IN sediment0.076923
LOWER IN marine sediment0.076923
mitochondrion0.076923
Exp. ID User ID Description Date Region Flag Sequences
236amnonmarine eelgrass mitochondria (other mitochondrion, zostera marina, marine eelgrass)2017-11-07v4No1 / 1
236amnondominant ocean, leaf, zostera marina, state of california, bodega bay, marine eelgrass2017-11-07v4No1 / 4
236amnondominant ocean, sediment, marine sediment, zostera marina, state of california, bodega bay, marine eelgrass2017-11-07v4No1 / 5
236amnondominant ocean, zostera marina, state of california, bodega bay, marine eelgrass, root2017-11-07v4No1 / 8
236amnondominant ocean, water, sea water, state of california, pacific ocean, bodega bay2017-11-07v4No1 / 21
236amnon high in leaf compared to root in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-07v4No1 / 287
236amnoncommon ocean, zostera marina, state of california, bodega bay, marine eelgrass, root2017-11-07v4No1 / 483
236amnoncommon ocean, leaf, zostera marina, state of california, bodega bay, marine eelgrass2017-11-07v4No1 / 505
236amnon high in root compared to sediment marine sediment in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-07v4No1 / 674
236amnon high in root compared to leaf in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-07v4No1 / 819
236amnoncommon ocean, water, sea water, state of california, pacific ocean, bodega bay2017-11-07v4No1 / 1156
236amnoncommon ocean, sediment, marine sediment, zostera marina, state of california, bodega bay, marine eelgrass2017-11-07v4No1 / 1904
236amnon high in sediment marine sediment compared to root in ocean zostera marina state of california bodega bay marine eelgrass 2017-11-07v4No1 / 2745

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