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Experiment ID: 240

Field	Description
name	the dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes.
sra	prjna231909
http	https://pubs.broadinstitute.org/diabimmune/data/9
datamd5	0d09d819260286393e1f93f3127d2e7d
mapmd5	17bced15922fe5893c1576703b1a5d07

Annotations for experiment:

term enrichment score

Term	Score
age < 3 years	0.400000
finland	0.222222
LOWER IN under-1-year-old human stage	0.142857
LOWER IN 1-year-old human stage	0.133333
under-1-year-old human stage	0.133333
1-year-old human stage	0.117647
age	0.086957
infant	0.057143
homo sapiens	0.006173
feces	0.005208

Fraction of dbbact annotations with this term covered by the query

Term	Score
age < 3 years	0.333333
finland	0.125000
LOWER IN under-1-year-old human stage	0.100000
LOWER IN 1-year-old human stage	0.090909
under-1-year-old human stage	0.090909
1-year-old human stage	0.076923
age	0.047619
infant	0.029412
homo sapiens	0.003096
feces	0.002611

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
feces	1.000000
infant	1.000000
finland	1.000000
age	0.500000
age < 3 years	0.500000
1-year-old human stage	0.250000
LOWER IN under-1-year-old human stage	0.250000
LOWER IN 1-year-old human stage	0.250000
under-1-year-old human stage	0.250000

Number of experiments associating the term to the sequence

Term	Score
1-year-old human stage	1.000000
LOWER IN under-1-year-old human stage	1.000000
homo sapiens	1.000000
feces	1.000000
infant	1.000000
finland	1.000000
age	1.000000
age < 3 years	1.000000
LOWER IN 1-year-old human stage	1.000000
under-1-year-old human stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
240	amnon	high freq. in infants age <3 years (dominant homo sapiens, feces, finland, infant, age < 3 years)	2017-11-12	v4	1 / 21	approved	No
240	amnon	higher in infants age<1 year compared to 1-3 years in baby feces ( high in under-1-year-old human stage age compared to 1-year-old human stage in homo sapiens feces infant finland )	2017-11-12	v4	1 / 35	approved	No
240	amnon	common in infants age <3 years (common homo sapiens, feces, finland, infant, age < 3 years)	2017-11-12	v4	1 / 36	approved	No
240	amnon	lower in infants age<1 year compared to 1-3 years in baby feces ( high in 1-year-old human stage age compared to under-1-year-old human stage in homo sapiens feces infant finland )	2017-11-12	v4	1 / 567	approved	No

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