Experiment ID: 266

Field Description
namehost genotype and age shape the leaf and root microbiomes of a wild perennial plant
sra prjeb10570
datamd56cd1304dd6ebcca9f30d99cce455f5d7
mapmd504f9b105e713231cb2389d4dd6e0cb5a

Annotations for experiment:

term enrichment score
TermScore
brassicaceae0.510638
state of idaho0.481928
boechera stricta0.465116
ph 5.50.258065
ph 60.205128
plant0.201681
ph 6.50.137931
root0.109375
fungal cell0.080000
leaf0.072289
LOWER IN leaf0.066667
LOWER IN root0.058824
pathogen0.057143
soil0.029718
united states of america0.009427
Fraction of dbbact annotations with this term covered by the query
TermScore
brassicaceae0.500000
boechera stricta0.500000
ph 5.50.500000
fungal cell0.500000
state of idaho0.333333
ph 6.50.333333
ph 60.250000
LOWER IN leaf0.142857
plant0.125000
LOWER IN root0.090909
pathogen0.083333
root0.066667
leaf0.050000
soil0.015385
united states of america0.004739
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.869565
state of idaho0.869565
brassicaceae0.521739
plant0.521739
boechera stricta0.434783
soil0.434783
root0.304348
ph 5.50.173913
ph 60.173913
leaf0.130435
ph 6.50.086957
LOWER IN leaf0.043478
LOWER IN root0.043478
pathogen0.043478
fungal cell0.043478
Exp. ID User ID Description Date Region Flag Sequences
266amnonplant mitochondria (other plant, brassicaceae)2017-12-18v4No1 / 0
266amnonbrassicaceae fungal pathogen (other pathogen, fungal cell)2017-12-18v4No1 / 4
266amnonhigh freq. in roots in SIL garden (dominant brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-19v4No1 / 5
266amnonhigh freq. in soil from JAM garden (dominant soil, united states of america, state of idaho, ph 5.5)2017-12-18v4No1 / 5
266amnonplant DNA (other plant, brassicaceae)2017-12-18v4No1 / 7
266amnonhigh freq. in soil from SIL garden (dominant soil, united states of america, state of idaho, ph 6)2017-12-18v4No1 / 7
266amnonhigh freq. in soil from PAR garden (dominant soil, united states of america, state of idaho, ph 5.5)2017-12-18v4No1 / 7
266amnonhigh freq. in soil from MIL garden (dominant soil, united states of america, state of idaho, ph 6.5)2017-12-18v4No1 / 7
266amnonhigh freq. in soil from MAH garden (dominant soil, united states of america, state of idaho, ph 6)2017-12-18v4No1 / 10
266amnonhigh freq. in roots in MAH garden (dominant brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-19v4No1 / 11
266amnonhigh freq. in roots in JAM garden (dominant brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-19v4No1 / 11
266amnonhigh freq. on perennial plant leaves (dominant brassicaceae, boechera stricta, plant, leaf, united states of america, state of idaho)2017-12-19v4No1 / 16
266amnoncommon on perennial plant leaves (common brassicaceae, boechera stricta, plant, leaf, united states of america, state of idaho)2017-12-19v4No1 / 155
266amnoncommon in roots in JAM garden (common brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-19v4No1 / 842
266amnoncommon in soil from MIL garden (common soil, united states of america, state of idaho, ph 6.5)2017-12-18v4No1 / 979
266amnoncommon in soil from PAR garden (common soil, united states of america, state of idaho, ph 5.5)2017-12-18v4No1 / 1031
266amnoncommon in roots in MAH garden (common brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-19v4No1 / 1109
266amnon high in leaf compared to root in brassicaceae boechera stricta plant united states of america state of idaho 2017-12-19v4No1 / 1174
266amnonCommon in soil from MAH garden (common soil, united states of america, state of idaho, ph 6)2017-12-18v4No1 / 1298
266amnoncommon in soil from SIL garden (common soil, united states of america, state of idaho, ph 6)2017-12-18v4No1 / 1388
266amnoncoomon in roots in SIL garden (common brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-19v4No1 / 1398
266amnoncommon in soil from JAM garden (common soil, united states of america, state of idaho, ph 5.5)2017-12-18v4No1 / 1455
266amnon high in root compared to leaf in brassicaceae boechera stricta plant united states of america state of idaho 2017-12-19v4No1 / 5885

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