Experiment ID: 266

Field Description
namehost genotype and age shape the leaf and root microbiomes of a wild perennial plant
sra prjeb10570
datamd56cd1304dd6ebcca9f30d99cce455f5d7
mapmd504f9b105e713231cb2389d4dd6e0cb5a

Annotations for experiment:

term enrichment score
TermScore
state of idaho0.634921
brassicaceae0.510638
boechera stricta0.465116
ph 5.50.258065
plant0.252632
ph 60.228571
ph 6.50.148148
root0.122807
fungal cell0.080000
leaf0.075000
LOWER IN leaf0.068966
LOWER IN root0.062500
pathogen0.058824
soil0.040568
united states of america0.012334
Fraction of dbbact annotations with this term covered by the query
TermScore
brassicaceae0.500000
boechera stricta0.500000
state of idaho0.500000
ph 5.50.500000
ph 6.50.500000
fungal cell0.500000
ph 60.333333
plant0.166667
LOWER IN leaf0.166667
LOWER IN root0.111111
pathogen0.090909
root0.076923
leaf0.052632
soil0.021277
united states of america0.006211
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.869565
state of idaho0.869565
brassicaceae0.521739
plant0.521739
boechera stricta0.434783
soil0.434783
root0.304348
ph 5.50.173913
ph 60.173913
leaf0.130435
ph 6.50.086957
LOWER IN leaf0.043478
LOWER IN root0.043478
pathogen0.043478
fungal cell0.043478
Exp. ID User ID Description Date Sequences
266amnonplant mitochondria (other plant, brassicaceae)2017-12-181 / 1
266amnonbrassicaceae fungal pathogen (other pathogen, fungal cell)2017-12-181 / 5
266amnonhigh freq. in soil from JAM garden (highfreq soil, united states of america, state of idaho, ph 5.5)2017-12-181 / 6
266amnonhigh freq. in roots in SIL garden (highfreq brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-191 / 6
266amnonhigh freq. in soil from MIL garden (highfreq soil, united states of america, state of idaho, ph 6.5)2017-12-181 / 8
266amnonhigh freq. in soil from PAR garden (highfreq soil, united states of america, state of idaho, ph 5.5)2017-12-181 / 8
266amnonhigh freq. in soil from SIL garden (highfreq soil, united states of america, state of idaho, ph 6)2017-12-181 / 8
266amnonplant DNA (other plant, brassicaceae)2017-12-181 / 8
266amnonhigh freq. in soil from MAH garden (highfreq soil, united states of america, state of idaho, ph 6)2017-12-181 / 11
266amnonhigh freq. in roots in JAM garden (highfreq brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-191 / 12
266amnonhigh freq. in roots in MAH garden (highfreq brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-191 / 12
266amnonhigh freq. on perennial plant leaves (highfreq brassicaceae, boechera stricta, plant, leaf, united states of america, state of idaho)2017-12-191 / 17
266amnoncommon on perennial plant leaves (common brassicaceae, boechera stricta, plant, leaf, united states of america, state of idaho)2017-12-191 / 156
266amnoncommon in roots in JAM garden (common brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-191 / 843
266amnoncommon in soil from MIL garden (common soil, united states of america, state of idaho, ph 6.5)2017-12-181 / 980
266amnoncommon in soil from PAR garden (common soil, united states of america, state of idaho, ph 5.5)2017-12-181 / 1032
266amnoncommon in roots in MAH garden (common brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-191 / 1110
266amnon high in leaf compared to root in brassicaceae boechera stricta plant united states of america state of idaho 2017-12-191 / 1175
266amnonCommon in soil from MAH garden (common soil, united states of america, state of idaho, ph 6)2017-12-181 / 1299
266amnoncommon in soil from SIL garden (common soil, united states of america, state of idaho, ph 6)2017-12-181 / 1389
266amnoncoomon in roots in SIL garden (common brassicaceae, boechera stricta, plant, united states of america, state of idaho, root)2017-12-191 / 1399
266amnoncommon in soil from JAM garden (common soil, united states of america, state of idaho, ph 5.5)2017-12-181 / 1456
266amnon high in root compared to leaf in brassicaceae boechera stricta plant united states of america state of idaho 2017-12-191 / 5886

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