dbBact

×

Experiment ID: 269

Field	Description
name	characterization of a microbial community developing during refrigerated storage of vacuum packed yao meat, a chinese traditional food
sra	srp118948
datamd5	999846a38cbb7d8dd4614ced1452481f
mapmd5	813bfb26b828074d1fec99211180e60c

Annotations for experiment:

term enrichment score

Term	Score
LOWER IN fresh	0.444444
LOWER IN food spoilage	0.444444
foodon product type	0.333333
middle timepoint	0.285714
two weeks	0.285714
fresh	0.285714
LOWER IN late timpoint	0.285714
food spoilage	0.285714
LOWER IN late timepoint	0.222222
early timepoint	0.222222
late timepoint	0.222222
LOWER IN early timepoint	0.222222
china	0.012739

Fraction of dbbact annotations with this term covered by the query

Term	Score
middle timepoint	0.500000
two weeks	0.500000
LOWER IN fresh	0.500000
LOWER IN food spoilage	0.500000
fresh	0.500000
LOWER IN late timpoint	0.500000
food spoilage	0.500000
LOWER IN late timepoint	0.250000
early timepoint	0.250000
late timepoint	0.250000
LOWER IN early timepoint	0.250000
foodon product type	0.200000
china	0.006410

Fraction of annotations for the query sequences containing the term

Term	Score
china	1.000000
foodon product type	1.000000
LOWER IN fresh	0.400000
LOWER IN food spoilage	0.400000
middle timepoint	0.200000
two weeks	0.200000
LOWER IN late timepoint	0.200000
fresh	0.200000
early timepoint	0.200000
LOWER IN late timpoint	0.200000
late timepoint	0.200000
food spoilage	0.200000
LOWER IN early timepoint	0.200000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
269	amnon	high freq. in fresh yao meat food (dominant china, foodon product type)	2018-01-09	v4	No	1 / 4
269	amnon	increases during one month in refrigeration of yao meat ( high in late timepoint food spoilage compared to fresh early timepoint in china foodon product type )	2018-01-09	v4	No	1 / 11
269	amnon	decreases during one month in refrigeration of yao meat ( high in fresh early timepoint compared to late timpoint food spoilage in china foodon product type )	2018-01-09	v4	No	1 / 34
269	amnon	peaks at 2 weeks in refrigeration of yao meat ( high in middle timepoint two weeks compared to fresh food spoilage late timepoint in china foodon product type )	2018-01-09	v4	No	1 / 83
269	amnon	common in fresh yao meat food (common china, foodon product type)	2018-01-09	v4	No	1 / 113

Problems / suggestions? Please email info AT dbbact DOT org