Experiment ID: 279

Field Description
namegut region influences the diversity and interactions of bacterial communities in pikas (ochotona curzoniae and ochotona daurica)
sraprjeb14755
datamd5419042ab9c1eb1df83706067303a9383
mapmd51f9ea69d5b578fce0103e91b10f97189

Annotations for experiment:

term enrichment score
TermScore
pikas0.526316
grassland0.470588
ochotonidae0.416667
steppe0.307692
mongolia0.266667
tibetan plateau0.235294
small intestine0.235294
stem0.210526
alpine soil0.181818
kobresia humilis0.181818
LOWER IN small intestine0.153846
stomach0.129032
LOWER IN stomach0.125000
colon0.090909
leaf0.085106
LOWER IN mouth0.083333
mouth0.080000
caecum0.076923
LOWER IN caecum0.074074
LOWER IN colon0.066667
soil0.038835
china0.027027
Fraction of dbbact annotations with this term covered by the query
TermScore
pikas0.500000
grassland0.500000
alpine soil0.500000
steppe0.500000
kobresia humilis0.500000
ochotonidae0.333333
mongolia0.333333
LOWER IN small intestine0.250000
tibetan plateau0.250000
small intestine0.250000
stem0.200000
LOWER IN mouth0.166667
LOWER IN stomach0.142857
LOWER IN caecum0.111111
stomach0.090909
LOWER IN colon0.083333
colon0.062500
leaf0.052632
mouth0.052632
caecum0.050000
soil0.021277
china0.013699
Fraction of annotations for the query sequences containing the term
TermScore
china1.000000
ochotonidae0.555556
pikas0.555556
grassland0.444444
soil0.222222
tibetan plateau0.222222
steppe0.222222
mongolia0.222222
leaf0.222222
stem0.222222
stomach0.222222
small intestine0.222222
caecum0.166667
colon0.166667
mouth0.166667
LOWER IN stomach0.111111
LOWER IN small intestine0.111111
alpine soil0.111111
kobresia humilis0.111111
LOWER IN caecum0.055556
LOWER IN colon0.055556
LOWER IN mouth0.055556
Exp. ID User ID Description Date Sequences
279amnonhighfreq china, grassland, tibetan plateau, leaf, stem, kobresia humilis2018-01-241 / 6
279amnonhighfreq china, grassland, soil, alpine soil, tibetan plateau2018-01-241 / 8
279amnonhighfreq china, ochotonidae, pikas, colon, caecum2018-01-241 / 10
279amnonhighfreq china, grassland, steppe, mongolia, soil2018-01-241 / 11
279amnonhighfreq china, grassland, leaf, stem, steppe, mongolia2018-01-241 / 12
279amnonhighfreq china, ochotonidae, pikas, stomach, small intestine2018-01-241 / 12
279amnonhighfreq china, ochotonidae, pikas, mouth2018-01-241 / 15
279amnon high in small intestine stomach compared to mouth in china ochotonidae pikas 2018-01-241 / 33
279amnon high in mouth compared to small intestine stomach in china ochotonidae pikas 2018-01-241 / 53
279amnon high in small intestine stomach compared to caecum colon in china ochotonidae pikas 2018-01-241 / 53
279amnoncommon china, ochotonidae, pikas, stomach, small intestine2018-01-241 / 77
279amnoncommon china, grassland, leaf, stem, steppe, mongolia2018-01-241 / 83
279amnoncommon china, ochotonidae, pikas, mouth2018-01-241 / 103
279amnoncommon china, grassland, tibetan plateau, leaf, stem, kobresia humilis2018-01-241 / 104
279amnoncommon china, ochotonidae, pikas, colon, caecum2018-01-241 / 146
279amnoncommon china, grassland, steppe, mongolia, soil2018-01-241 / 235
279amnoncommon china, grassland, soil, alpine soil, tibetan plateau2018-01-241 / 253
279amnon high in caecum colon compared to stomach small intestine in china ochotonidae pikas 2018-01-241 / 634

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