Experiment ID: 279

Field Description
namegut region influences the diversity and interactions of bacterial communities in pikas (ochotona curzoniae and ochotona daurica)
sraprjeb14755
datamd5419042ab9c1eb1df83706067303a9383
mapmd51f9ea69d5b578fce0103e91b10f97189

Annotations for experiment:

term enrichment score
TermScore
grassland0.470588
ochotonidae0.416667
pika0.416667
steppe0.307692
tibetan plateau0.190476
mongolia0.190476
small intestine0.190476
alpine soil0.181818
kobresia humilis0.181818
stem0.173913
LOWER IN small intestine0.133333
LOWER IN stomach0.105263
stomach0.093023
LOWER IN mouth0.080000
leaf0.075472
colon0.068966
mouth0.064516
LOWER IN colon0.055556
LOWER IN caecum0.054054
caecum0.036364
soil0.018957
china0.009852
Fraction of dbbact annotations with this term covered by the query
TermScore
grassland0.500000
alpine soil0.500000
steppe0.500000
kobresia humilis0.500000
ochotonidae0.333333
pika0.333333
LOWER IN small intestine0.166667
tibetan plateau0.166667
mongolia0.166667
small intestine0.166667
stem0.142857
LOWER IN mouth0.142857
LOWER IN stomach0.100000
stomach0.058824
LOWER IN colon0.055556
LOWER IN caecum0.052632
leaf0.045455
colon0.043478
mouth0.040000
caecum0.020408
soil0.009901
china0.004950
Fraction of annotations for the query sequences containing the term
TermScore
china1.000000
ochotonidae0.555556
pika0.555556
grassland0.444444
soil0.222222
tibetan plateau0.222222
steppe0.222222
mongolia0.222222
leaf0.222222
stem0.222222
stomach0.222222
small intestine0.222222
caecum0.166667
colon0.166667
mouth0.166667
LOWER IN stomach0.111111
LOWER IN small intestine0.111111
alpine soil0.111111
kobresia humilis0.111111
LOWER IN caecum0.055556
LOWER IN colon0.055556
LOWER IN mouth0.055556
Number of experiments associating the term to the sequence
TermScore
caecum1.000000
colon1.000000
LOWER IN stomach1.000000
LOWER IN small intestine1.000000
ochotonidae1.000000
pika1.000000
china1.000000
grassland1.000000
soil1.000000
alpine soil1.000000
tibetan plateau1.000000
steppe1.000000
mongolia1.000000
leaf1.000000
stem1.000000
kobresia humilis1.000000
mouth1.000000
stomach1.000000
small intestine1.000000
LOWER IN caecum1.000000
LOWER IN colon1.000000
LOWER IN mouth1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
279amnondominant grassland, leaf, stem, tibetan plateau, kobresia humilis, china2018-01-24v41 / 6approvedNo
279amnondominant grassland, soil, alpine soil, tibetan plateau, china2018-01-24v41 / 8approvedNo
279amnondominant caecum, colon, ochotonidae, pika, china2018-01-24v41 / 10approvedNo
279amnondominant grassland, steppe, soil, mongolia, china2018-01-24v41 / 11approvedNo
279amnondominant grassland, steppe, leaf, stem, mongolia, china2018-01-24v41 / 12approvedNo
279amnondominant stomach, small intestine, ochotonidae, pika, china2018-01-24v41 / 12approvedNo
279amnondominant ochotonidae, pika, mouth, china2018-01-24v41 / 15approvedNo
279amnon high in stomach small intestine compared to mouth in ochotonidae pika china 2018-01-24v41 / 33approvedNo
279amnon high in mouth compared to stomach small intestine in ochotonidae pika china 2018-01-24v41 / 53approvedNo
279amnon high in stomach small intestine compared to caecum colon in ochotonidae pika china 2018-01-24v41 / 53approvedNo
279amnoncommon stomach, small intestine, ochotonidae, pika, china2018-01-24v41 / 77approvedNo
279amnoncommon grassland, steppe, leaf, stem, mongolia, china2018-01-24v41 / 83approvedNo
279amnoncommon ochotonidae, pika, mouth, china2018-01-24v41 / 103approvedNo
279amnoncommon grassland, leaf, stem, tibetan plateau, kobresia humilis, china2018-01-24v41 / 104approvedNo
279amnoncommon caecum, colon, ochotonidae, pika, china2018-01-24v41 / 146approvedNo
279amnoncommon grassland, steppe, soil, mongolia, china2018-01-24v41 / 235approvedNo
279amnoncommon grassland, soil, alpine soil, tibetan plateau, china2018-01-24v41 / 253approvedNo
279amnon high in caecum colon compared to stomach small intestine in ochotonidae pika china 2018-01-24v41 / 634approvedNo

Problems / suggestions? Please visit the dbBact forum