Experiment ID: 313

Field Description
namedietary live yeast and increased water temperature influence the gut microbiota of rainbow trout
sraprjna408116
datamd5ac6ae316b34230ccb63f263dd67a73ca
mapmd5a2670ca1c83249c3f04c85b984301092

Annotations for experiment:

term enrichment score
TermScore
cold environment0.444444
gut content0.444444
18c0.444444
12c0.400000
warm temperature habitat0.400000
oncorhynchus mykiss0.388060
rainbow trout0.388060
LOWER IN warm temperature habitat0.210526
LOWER IN 12c0.210526
LOWER IN cold environment0.210526
gastrointestinal system mucosa0.210526
fish feed0.190476
sweden0.125000
fish0.123810
temp 12c0.117647
LOWER IN temp 18c0.117647
LOWER IN 18c0.117647
warm termpterature habitat0.117647
LOWER IN yeast diet0.117647
fishmeal diet0.111111
digestive system0.051081
research facility0.013499
Fraction of dbbact annotations with this term covered by the query
TermScore
temp 12c0.500000
cold environment0.500000
LOWER IN warm temperature habitat0.500000
LOWER IN temp 18c0.500000
gut content0.500000
12c0.500000
LOWER IN 18c0.500000
warm temperature habitat0.500000
18c0.500000
LOWER IN 12c0.500000
LOWER IN cold environment0.500000
warm termpterature habitat0.500000
LOWER IN yeast diet0.500000
fish feed0.333333
fishmeal diet0.333333
oncorhynchus mykiss0.250000
rainbow trout0.250000
gastrointestinal system mucosa0.142857
sweden0.066667
fish0.066667
digestive system0.026316
research facility0.006803
Fraction of annotations for the query sequences containing the term
TermScore
sweden1.000000
digestive system0.866667
research facility0.866667
oncorhynchus mykiss0.866667
fish0.866667
rainbow trout0.866667
cold environment0.400000
gut content0.400000
gastrointestinal system mucosa0.400000
18c0.400000
12c0.333333
warm temperature habitat0.333333
fish feed0.133333
LOWER IN warm temperature habitat0.133333
LOWER IN 12c0.133333
LOWER IN cold environment0.133333
temp 12c0.066667
LOWER IN temp 18c0.066667
LOWER IN 18c0.066667
warm termpterature habitat0.066667
fishmeal diet0.066667
LOWER IN yeast diet0.066667
Exp. ID User ID Description Date Region Flag Sequences
313amnon high in fishmeal diet compared to yeast diet in digestive system research facility oncorhynchus mykiss sweden fish rainbow trout 2018-04-10v4No1 / 2
313amnonlower in gut content of fish grown in 12C compared to 18C water ( high in warm temperature habitat 18c compared to 12c cold environment in digestive system research facility oncorhynchus mykiss sweden fish rainbow trout gut content )2018-04-10v4No1 / 3
313amnonlower in gut mucosa of fish grown in 12C compared to 18C water ( high in 18c warm termpterature habitat compared to 12c cold environment in digestive system research facility gastrointestinal system mucosa oncorhynchus mykiss sweden fish rainbow trout )2018-04-10v4No1 / 3
313amnonhigh freq. in rainbow trout gut mucosa grown in 18C water (dominant digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, warm temperature habitat, 18c)2018-04-10v4No1 / 5
313amnonhigh freq. in rainbow trout gut content grown in 18C water (dominant digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, warm temperature habitat, 18c)2018-04-10v4No1 / 5
313amnonhigh freq. in rainbow trout gut mucosa grown in 12C water (dominant digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, 12c, cold environment)2018-04-10v4No1 / 6
313amnoncommon in rainbow trout gut mucosa grown in 18C water (common digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, warm temperature habitat, 18c)2018-04-10v4No1 / 8
313amnoncommon in rainbow trout gut content grown in 18C water (common digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, warm temperature habitat, 18c)2018-04-10v4No1 / 9
313amnonhigh freq. in rainbow trout gut content grown in 12C water (dominant digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, 12c, cold environment)2018-04-10v4No1 / 10
313amnoncommon in rainbow trout gut mucosa grown in 12C water (common digestive system, research facility, gastrointestinal system mucosa, oncorhynchus mykiss, sweden, fish, rainbow trout, 12c, cold environment)2018-04-10v4No1 / 13
313amnonhigh freq. in fishfeed (dominant sweden, fish feed)2018-04-10v4No1 / 14
313amnonhigher in gut mucosa of fish grown in 12C compared to 18C water ( high in 12c cold environment compared to warm temperature habitat 18c in digestive system research facility gastrointestinal system mucosa oncorhynchus mykiss sweden fish rainbow trout )2018-04-10v4No1 / 15
313amnoncommon in rainbow trout gut content grown in 12C water (common digestive system, research facility, oncorhynchus mykiss, sweden, fish, rainbow trout, gut content, 12c, cold environment)2018-04-10v4No1 / 31
313amnonhigher in gut content of fish grown in 12C compared to 18C water ( high in temp 12c cold environment compared to warm temperature habitat temp 18c in digestive system research facility oncorhynchus mykiss sweden fish rainbow trout gut content )2018-04-10v4No1 / 55
313amnoncommon in fishfeed (common sweden, fish feed)2018-04-10v4No1 / 71

Problems / suggestions? Please email info AT dbbact DOT org