Experiment ID: 323

Field Description
namemicrobial community richness distinguishes shark species microbiomes in south florida
sraprjna393438
datamd50899fa026fee770d20ff4b3d47ac270d
mapmd5dc3e642be0816011cb9334b8167f3f50

Annotations for experiment:

term enrichment score
TermScore
south florida0.666667
shark0.611111
depth (water) 0cm0.230769
anal canal0.222222
gill0.206897
LOWER IN shark0.125000
surface water0.120000
LOWER IN depth (water) 0cm0.111111
state of florida0.105263
LOWER IN gill0.105263
atlantic ocean0.076923
LOWER IN surface water0.076923
dentition0.072289
LOWER IN dentition0.054054
skin0.051724
sea water0.049180
depth (soil) 0-20cm0.041667
LOWER IN skin0.041667
LOWER IN sea water0.040000
water0.033520
LOWER IN water0.028986
united states of america0.007692
Fraction of dbbact annotations with this term covered by the query
TermScore
south florida0.500000
LOWER IN shark0.500000
shark0.500000
anal canal0.500000
depth (water) 0cm0.250000
LOWER IN depth (water) 0cm0.250000
gill0.200000
LOWER IN gill0.200000
surface water0.083333
LOWER IN surface water0.083333
state of florida0.055556
dentition0.043478
LOWER IN dentition0.043478
atlantic ocean0.040000
skin0.029412
LOWER IN skin0.029412
sea water0.027778
LOWER IN sea water0.027778
depth (soil) 0-20cm0.024390
water0.018182
LOWER IN water0.018182
united states of america0.003861
Fraction of annotations for the query sequences containing the term
TermScore
atlantic ocean1.000000
south florida1.000000
state of florida1.000000
united states of america1.000000
shark0.785714
depth (water) 0cm0.214286
water0.214286
surface water0.214286
sea water0.214286
skin0.214286
gill0.214286
dentition0.214286
depth (soil) 0-20cm0.142857
anal canal0.142857
LOWER IN shark0.071429
LOWER IN depth (water) 0cm0.071429
LOWER IN water0.071429
LOWER IN surface water0.071429
LOWER IN sea water0.071429
LOWER IN dentition0.071429
LOWER IN skin0.071429
LOWER IN gill0.071429
Number of experiments associating the term to the sequence
TermScore
depth (water) 0cm1.000000
atlantic ocean1.000000
south florida1.000000
state of florida1.000000
united states of america1.000000
water1.000000
surface water1.000000
LOWER IN shark1.000000
sea water1.000000
depth (soil) 0-20cm1.000000
shark1.000000
skin1.000000
gill1.000000
anal canal1.000000
dentition1.000000
LOWER IN depth (water) 0cm1.000000
LOWER IN water1.000000
LOWER IN surface water1.000000
LOWER IN sea water1.000000
LOWER IN dentition1.000000
LOWER IN skin1.000000
LOWER IN gill1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
323amnondominant depth (water) 0cm, depth (soil) 0-20cm, water, atlantic ocean, south florida, state of florida, united states of america, surface water, sea water2018-04-24v41 / 12approvedNo
323amnonhigh freq. in shark cloaca (dominant atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v41 / 12approvedNo
323amnonhigh freq. in shark skin (dominant atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v41 / 13approvedNo
323amnonhigh freq. in shark gills (dominant atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v41 / 15approvedNo
323amnonhigh freq. in shark teeth (dominant atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v41 / 19approvedNo
323amnonhigher in teeth compared to skin and gills in sharks ( high in dentition compared to skin gill in atlantic ocean south florida state of florida united states of america shark )2018-04-24v41 / 25approvedNo
323amnonlower in teeth compared to skin and gills in sharks ( high in gill skin compared to dentition in atlantic ocean south florida state of florida united states of america shark )2018-04-24v41 / 98approvedNo
323amnonhigher in sharks compared to sea water ( high in shark compared to depth (water) 0cm water surface water sea water in atlantic ocean south florida state of florida united states of america )2018-04-24v41 / 107approvedNo
323amnoncommon freq. in shark teeth (common atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v41 / 123approvedNo
323amnoncommon in shark cloaca (common atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v41 / 167approvedNo
323amnoncommon in shark gills (common atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v41 / 170approvedNo
323amnoncommon in shark skin (common atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v41 / 213approvedNo
323amnoncommon depth (water) 0cm, depth (soil) 0-20cm, water, atlantic ocean, south florida, state of florida, united states of america, surface water, sea water2018-04-24v41 / 504approvedNo
323amnonlower in sharks compared to sea water ( high in depth (water) 0cm water surface water sea water compared to shark in atlantic ocean south florida state of florida united states of america )2018-04-24v41 / 979approvedNo

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