dbBact

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Experiment ID: 327

Field	Description
name	injectable antimicrobials in commercial feedlot cattle and their effect on the nasopharyngeal microbiota and antimicrobial resistance
sra	prjna394129
datamd5	1d2527bb9f87b4724cae39cf770e0283
mapmd5	7a723bfc691129fede90f851b50f05b8

Annotations for experiment:

term enrichment score

Term	Score
nasopharynx	0.181818
cow	0.166667
LOWER IN antibiotic	0.117647
antibiotic	0.111111
bos taurus	0.111111
canada	0.090909
LOWER IN control	0.011494
control	0.011364

Fraction of dbbact annotations with this term covered by the query

Term	Score
nasopharynx	0.100000
cow	0.090909
LOWER IN antibiotic	0.076923
antibiotic	0.071429
bos taurus	0.058824
canada	0.047619
LOWER IN control	0.005882
control	0.005814

Fraction of annotations for the query sequences containing the term

Term	Score
nasopharynx	1.000000
bos taurus	1.000000
canada	1.000000
cow	1.000000
control	0.250000
LOWER IN antibiotic	0.250000
antibiotic	0.250000
LOWER IN control	0.250000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
327	amnon	higher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in nasopharynx bos taurus canada cow )	2018-04-30	v4	No	1 / 4
327	amnon	dominant nasopharynx, bos taurus, canada, cow	2018-04-30	v4	No	1 / 15
327	amnon	lower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in nasopharynx bos taurus canada cow )	2018-04-30	v4	No	1 / 45
327	amnon	common nasopharynx, bos taurus, canada, cow	2018-04-30	v4	No	1 / 50

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