dbBact

Experiment ID: 332

Field	Description
name	influence of the intestinal microbiota on the immunogenicity of oral rotavirus vaccine given to infants in south india
sra	prjeb21946
datamd5	dfa01d41a55f39c8c6fbcf9eaddb190a
mapmd5	97ec61cd8980dee72f4d86b39d2a8143

Annotations for experiment:

term enrichment score

Term	Score
vellore district	0.666667
2-month-old human stage	0.400000
probiotics	0.285714
india	0.166667
city	0.080000
infant	0.055556
LOWER IN control	0.009390
homo sapiens	0.005510

Fraction of dbbact annotations with this term covered by the query

Term	Score
vellore district	0.500000
2-month-old human stage	0.250000
probiotics	0.250000
india	0.090909
city	0.041667
infant	0.028571
LOWER IN control	0.004762
homo sapiens	0.002762

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
city	1.000000
infant	1.000000
vellore district	1.000000
india	1.000000
2-month-old human stage	1.000000
probiotics	0.333333
LOWER IN control	0.333333

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
city	1.000000
infant	1.000000
vellore district	1.000000
india	1.000000
2-month-old human stage	1.000000
probiotics	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
332	amnon	higher in infants treated with Lactobacillus rhamnosus GG probiotics compared to non-treated ( high in probiotics compared to control in homo sapiens city infant vellore district india 2-month-old human stage )	2018-05-14	v4	1 / 5	approved	No
332	amnon	common homo sapiens, city, infant, vellore district, india, 2-month-old human stage	2018-05-14	v4	1 / 8	approved	No
332	amnon	dominant homo sapiens, city, infant, vellore district, india, 2-month-old human stage	2018-05-14	v4	1 / 9	approved	No

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