dbBact

×

Experiment ID: 347

Field	Description
name	disentangling the complexity of permafrost soil by using high resolution profiling of microbial community composition, key functions and respiration rates
sra	prjeb21759
datamd5	25f8c31c72001f97d0f382631e749647
mapmd5	a6c9dbf4a193021b750bd72754e0d12f

Annotations for experiment:

term enrichment score

Term	Score
svalbard archipelago	0.666667
permafrost	0.400000
depth 20-30cm	0.400000
depth 100-150cm	0.333333
depth 150-200cm	0.333333
LOWER IN depth 20-30cm	0.250000
permafrost active layer	0.250000
kingdom of norway	0.222222
depth 0-20cm	0.166667
LOWER IN depth 100-150cm	0.142857
LOWER IN depth 150-200cm	0.142857
LOWER IN depth 0-20cm	0.142857
LOWER IN permafrost transition layer	0.142857
permafrost transition layer	0.142857
soil	0.029851

Fraction of dbbact annotations with this term covered by the query

Term	Score
svalbard archipelago	0.500000
depth 20-30cm	0.500000
LOWER IN depth 100-150cm	0.500000
LOWER IN depth 150-200cm	0.500000
LOWER IN depth 0-20cm	0.500000
LOWER IN permafrost transition layer	0.500000
permafrost transition layer	0.500000
LOWER IN depth 20-30cm	0.500000
permafrost active layer	0.500000
depth 100-150cm	0.500000
depth 150-200cm	0.500000
permafrost	0.250000
kingdom of norway	0.125000
depth 0-20cm	0.125000
soil	0.015152

Fraction of annotations for the query sequences containing the term

Term	Score
kingdom of norway	1.000000
svalbard archipelago	1.000000
permafrost	1.000000
soil	1.000000
depth 20-30cm	0.333333
depth 0-20cm	0.250000
depth 100-150cm	0.250000
depth 150-200cm	0.250000
LOWER IN depth 20-30cm	0.166667
permafrost active layer	0.166667
LOWER IN depth 100-150cm	0.083333
LOWER IN depth 150-200cm	0.083333
LOWER IN depth 0-20cm	0.083333
LOWER IN permafrost transition layer	0.083333
permafrost transition layer	0.083333

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 100-150cm	2018-07-15	v4	No	1 / -2
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 150-200cm	2018-07-15	v4	No	1 / -2
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 20-30cm	2018-07-15	v4	No	1 / 2
347	amnon	dominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 0-20cm, permafrost active layer	2018-07-15	v4	No	1 / 3
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth 150-200cm	2018-07-15	v4	No	1 / 118
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth 100-150cm	2018-07-15	v4	No	1 / 165
347	amnon	high in depth 100-150cm depth 150-200cm compared to depth 20-30cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	No	1 / 213
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth 0-20cm, permafrost active layer	2018-07-15	v4	No	1 / 397
347	amnon	high in depth 0-20cm permafrost transition layer compared to depth 20-30cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	No	1 / 469
347	amnon	common kingdom of norway, svalbard archipelago, permafrost, soil, depth 20-30cm	2018-07-15	v4	No	1 / 690
347	amnon	high in depth 20-30cm compared to depth 0-20cm permafrost transition layer in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	No	1 / 780
347	amnon	high in depth 20-30cm compared to depth 100-150cm depth 150-200cm in kingdom of norway svalbard archipelago permafrost soil	2018-07-15	v4	No	1 / 1072

Problems / suggestions? Please email info AT dbbact DOT org