Experiment ID: 353

Field Description
namecaptivity and exposure to the emerging fungal pathogen batrachochytrium salamandrivorans are linked to perturbation and dysbiosis of the amphibian skin microbiome
sraprjna430498
datamd5e88334c1f5c0526b2a44d6289ed2c646
mapmd503b27b2b38764b30a0b8cd830ecb7012

Annotations for experiment:

term enrichment score
TermScore
cambridgeshire0.666667
newt0.500000
lissotriton vulgaris0.500000
triturus cristatus0.500000
united kingdom0.153846
LOWER IN research facility0.153846
LOWER IN wild0.105263
wild0.066667
skin0.058824
research facility0.013793
adult0.012121
Fraction of dbbact annotations with this term covered by the query
TermScore
cambridgeshire0.500000
lissotriton vulgaris0.500000
triturus cristatus0.500000
newt0.333333
LOWER IN research facility0.142857
united kingdom0.083333
LOWER IN wild0.076923
wild0.041667
skin0.030303
research facility0.006993
adult0.006098
Fraction of annotations for the query sequences containing the term
TermScore
newt1.000000
adult1.000000
skin1.000000
cambridgeshire1.000000
united kingdom1.000000
lissotriton vulgaris0.500000
triturus cristatus0.500000
research facility0.500000
wild0.166667
LOWER IN research facility0.166667
LOWER IN wild0.166667
Exp. ID User ID Description Date Region Flag Sequences
353amnonhigh freq. in wild Triturus cristatus newts skin (dominant newt, adult, skin, cambridgeshire, triturus cristatus, united kingdom)2018-07-30v4No1 / 10
353amnonhigh freq. in wild Lissotriton vulgaris newts skin (dominant newt, adult, skin, lissotriton vulgaris, cambridgeshire, united kingdom)2018-07-30v4No1 / 10
353amnonhigh freq. in captive Triturus cristatus newts skin (dominant newt, adult, skin, cambridgeshire, triturus cristatus, research facility, united kingdom)2018-07-30v4No1 / 17
353amnonhigh freq. in captive Lissotriton vulgaris newts skin (dominant newt, adult, skin, cambridgeshire, research facility, lissotriton vulgaris, united kingdom)2018-07-30v4No1 / 20
353amnoncommon in captive Triturus cristatus newts skin (common newt, adult, skin, cambridgeshire, triturus cristatus, research facility, united kingdom)2018-07-30v4No1 / 84
353amnoncommon in captive Lissotriton vulgaris newts skin (common newt, adult, skin, cambridgeshire, research facility, lissotriton vulgaris, united kingdom)2018-07-30v4No1 / 86
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in newt adult skin cambridgeshire lissotriton vulgaris united kingdom )2018-07-30v4No1 / 110
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in newt adult skin cambridgeshire triturus cristatus united kingdom )2018-07-30v4No1 / 135
353amnoncommon in wild Lissotriton vulgaris newts skin (common newt, adult, skin, lissotriton vulgaris, cambridgeshire, united kingdom)2018-07-30v4No1 / 418
353amnoncommon in wild Triturus cristatus newts skin (common newt, adult, skin, cambridgeshire, triturus cristatus, united kingdom)2018-07-30v4No1 / 456
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in newt adult skin cambridgeshire triturus cristatus united kingdom )2018-07-30v4No1 / 1834
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in newt adult skin cambridgeshire lissotriton vulgaris united kingdom )2018-07-30v4No1 / 2162

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