Experiment ID: 353

Field Description
namecaptivity and exposure to the emerging fungal pathogen batrachochytrium salamandrivorans are linked to perturbation and dysbiosis of the amphibian skin microbiome
sraprjna430498
datamd5e88334c1f5c0526b2a44d6289ed2c646
mapmd503b27b2b38764b30a0b8cd830ecb7012

Annotations for experiment:

term enrichment score
TermScore
cambridgeshire0.666667
newt0.500000
lissotriton vulgaris0.500000
triturus cristatus0.500000
LOWER IN research facility0.222222
united kingdom0.200000
LOWER IN wild0.166667
wild0.133333
skin0.083333
adult0.029412
research facility0.020833
Fraction of dbbact annotations with this term covered by the query
TermScore
cambridgeshire0.500000
lissotriton vulgaris0.500000
triturus cristatus0.500000
newt0.333333
LOWER IN research facility0.333333
LOWER IN wild0.166667
united kingdom0.111111
wild0.111111
skin0.043478
adult0.014925
research facility0.010638
Fraction of annotations for the query sequences containing the term
TermScore
newt1.000000
adult1.000000
united kingdom1.000000
skin1.000000
cambridgeshire1.000000
lissotriton vulgaris0.500000
triturus cristatus0.500000
research facility0.500000
wild0.166667
LOWER IN research facility0.166667
LOWER IN wild0.166667
Exp. ID User ID Description Date Sequences
353amnonhigh freq. in wild Triturus cristatus newts skin (highfreq newt, adult, united kingdom, skin, cambridgeshire, triturus cristatus)2018-07-301 / 10
353amnonhigh freq. in wild Lissotriton vulgaris newts skin (highfreq newt, adult, united kingdom, skin, lissotriton vulgaris, cambridgeshire)2018-07-301 / 10
353amnonhigh freq. in captive Triturus cristatus newts skin (highfreq newt, adult, united kingdom, skin, cambridgeshire, triturus cristatus, research facility)2018-07-301 / 17
353amnonhigh freq. in captive Lissotriton vulgaris newts skin (highfreq newt, adult, united kingdom, skin, cambridgeshire, research facility, lissotriton vulgaris)2018-07-301 / 20
353amnoncommon in captive Triturus cristatus newts skin (common newt, adult, united kingdom, skin, cambridgeshire, triturus cristatus, research facility)2018-07-301 / 84
353amnoncommon in captive Lissotriton vulgaris newts skin (common newt, adult, united kingdom, skin, cambridgeshire, research facility, lissotriton vulgaris)2018-07-301 / 86
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in newt adult united kingdom skin cambridgeshire lissotriton vulgaris )2018-07-301 / 110
353amnonhigher in captive compared to wild caught Lissotriton vulgaris newts skin ( high in research facility compared to wild in newt adult united kingdom skin cambridgeshire triturus cristatus )2018-07-301 / 135
353amnoncommon in wild Lissotriton vulgaris newts skin (common newt, adult, united kingdom, skin, lissotriton vulgaris, cambridgeshire)2018-07-301 / 418
353amnoncommon in wild Triturus cristatus newts skin (common newt, adult, united kingdom, skin, cambridgeshire, triturus cristatus)2018-07-301 / 456
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in newt adult united kingdom skin cambridgeshire triturus cristatus )2018-07-301 / 1834
353amnonlower in captive compared to wild caught Lissotriton vulgaris newts skin ( high in wild compared to research facility in newt adult united kingdom skin cambridgeshire lissotriton vulgaris )2018-07-301 / 2162

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