Experiment ID: 354

Field Description
namebacterial biogeography of adult airways in atopic asthma
sraprjeb15534
sraprjeb22676
datamd597a7ad79c11391be97c8a25c415b407c
mapmd55e5b3e77f3eba62760c068eae94e67b9

Annotations for experiment:

term enrichment score
TermScore
bronchial brush0.363636
induced sputum0.363636
bronchus0.307692
sputum0.307692
oral wash0.307692
bronchial epithelium0.235294
LOWER IN oral wash0.222222
LOWER IN sputum0.222222
LOWER IN induced sputum0.222222
LOWER IN bronchial epithelium0.222222
LOWER IN bronchial brush0.222222
LOWER IN bronchus0.222222
nasal brush0.222222
LOWER IN saliva0.125000
pair of nares0.125000
nasal cavity0.125000
saliva0.070175
adult0.025641
homo sapiens0.012821
united states of america0.010753
Fraction of dbbact annotations with this term covered by the query
TermScore
bronchial brush0.500000
LOWER IN oral wash0.500000
induced sputum0.500000
LOWER IN sputum0.500000
LOWER IN induced sputum0.500000
LOWER IN bronchial epithelium0.500000
LOWER IN bronchial brush0.500000
LOWER IN bronchus0.500000
nasal brush0.500000
bronchus0.333333
sputum0.333333
oral wash0.333333
bronchial epithelium0.200000
LOWER IN saliva0.111111
pair of nares0.111111
nasal cavity0.111111
saliva0.040000
adult0.012987
homo sapiens0.006452
united states of america0.005405
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
adult1.000000
bronchus0.285714
bronchial brush0.285714
bronchial epithelium0.285714
sputum0.285714
induced sputum0.285714
saliva0.285714
oral wash0.285714
LOWER IN saliva0.142857
LOWER IN oral wash0.142857
LOWER IN sputum0.142857
LOWER IN induced sputum0.142857
LOWER IN bronchial epithelium0.142857
LOWER IN bronchial brush0.142857
LOWER IN bronchus0.142857
pair of nares0.142857
nasal cavity0.142857
nasal brush0.142857
Exp. ID User ID Description Date Region Flag Sequences
354amnon high in saliva oral wash compared to sputum induced sputum in homo sapiens united states of america adult 2018-07-30v4No1 / 7
354amnonhighfreq homo sapiens, united states of america, adult, pair of nares, nasal cavity, nasal brush2018-07-30v4No1 / 10
354amnonhighfreq homo sapiens, united states of america, adult, sputum, induced sputum2018-07-30v4No1 / 11
354amnonhighfreq homo sapiens, united states of america, adult, saliva, oral wash2018-07-30v4No1 / 12
354amnonhighfreq homo sapiens, united states of america, adult, bronchial brush, bronchus, bronchial epithelium2018-07-30v4No1 / 15
354amnon high in induced sputum sputum compared to saliva oral wash in homo sapiens united states of america adult 2018-07-30v4No1 / 24
354amnoncommon homo sapiens, united states of america, adult, pair of nares, nasal cavity, nasal brush2018-07-30v4No1 / 26
354amnon high in sputum induced sputum compared to bronchial brush bronchus bronchial epithelium in homo sapiens united states of america adult 2018-07-30v4No1 / 32
354amnon high in saliva oral wash compared to bronchial epithelium bronchial brush bronchus in homo sapiens united states of america adult 2018-07-30v4No1 / 33
354amnoncommon homo sapiens, united states of america, adult, saliva, oral wash2018-07-30v4No1 / 52
354amnon high in bronchus bronchial epithelium bronchial brush compared to sputum induced sputum in homo sapiens united states of america adult 2018-07-30v4No1 / 55
354amnoncommon homo sapiens, united states of america, adult, sputum, induced sputum2018-07-30v4No1 / 63
354amnoncommon homo sapiens, united states of america, adult, bronchial brush, bronchus, bronchial epithelium2018-07-30v4No1 / 65
354amnon high in bronchus bronchial brush bronchial epithelium compared to saliva oral wash in homo sapiens united states of america adult 2018-07-30v4No1 / 94

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