Experiment ID: 360

Field Description
nameplant compartment and biogeography affect microbiome composition in cultivated and native agave species
sraprjna266662
datamd5b42ab34a5f5bb09ebcceff9d052021f8
mapmd55d504fe2b9d856ac9f7e1e9cd6af7ff8

Annotations for experiment:

term enrichment score
TermScore
agave0.593407
guanajuato0.554217
agave deserti0.301887
agave salmiana0.301887
agave tequiliana0.301887
desert0.222222
root endosphere0.196721
leaf endosphere0.196721
leaf surface0.194444
mexico0.192857
cultivated environment0.176000
root0.094488
leaf0.083871
state of california0.068230
LOWER IN agave0.051282
LOWER IN leaf surface0.047619
rhizosphere0.039130
LOWER IN spring0.037736
spring0.037736
LOWER IN leaf0.034483
summer0.032787
LOWER IN summer0.032787
LOWER IN rhizosphere0.023810
soil0.019384
LOWER IN soil0.016736
Fraction of dbbact annotations with this term covered by the query
TermScore
guanajuato0.500000
agave0.500000
LOWER IN agave0.500000
agave deserti0.500000
agave salmiana0.500000
agave tequiliana0.500000
root endosphere0.250000
leaf endosphere0.250000
LOWER IN leaf surface0.200000
leaf surface0.200000
desert0.125000
cultivated environment0.125000
mexico0.111111
root0.066667
LOWER IN spring0.062500
spring0.062500
LOWER IN leaf0.047619
leaf0.047619
summer0.041667
LOWER IN summer0.041667
state of california0.037037
LOWER IN rhizosphere0.021277
rhizosphere0.021277
soil0.009901
LOWER IN soil0.009901
Fraction of annotations for the query sequences containing the term
TermScore
desert1.000000
mexico0.729730
agave0.729730
guanajuato0.621622
soil0.459459
state of california0.432432
leaf0.351351
cultivated environment0.297297
rhizosphere0.243243
agave deserti0.216216
agave salmiana0.216216
agave tequiliana0.216216
leaf surface0.189189
root endosphere0.162162
root0.162162
leaf endosphere0.162162
LOWER IN soil0.054054
LOWER IN leaf0.027027
LOWER IN leaf surface0.027027
LOWER IN agave0.027027
LOWER IN rhizosphere0.027027
LOWER IN spring0.027027
summer0.027027
spring0.027027
LOWER IN summer0.027027
Number of experiments associating the term to the sequence
TermScore
soil1.000000
LOWER IN leaf1.000000
LOWER IN leaf surface1.000000
desert1.000000
state of california1.000000
mexico1.000000
guanajuato1.000000
agave1.000000
LOWER IN agave1.000000
LOWER IN rhizosphere1.000000
agave deserti1.000000
leaf1.000000
leaf surface1.000000
LOWER IN soil1.000000
rhizosphere1.000000
cultivated environment1.000000
agave salmiana1.000000
LOWER IN spring1.000000
summer1.000000
agave tequiliana1.000000
spring1.000000
LOWER IN summer1.000000
root endosphere1.000000
root1.000000
leaf endosphere1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
360amnondominant desert, soil, rhizosphere, agave, agave deserti, state of california2018-08-21v41 / 3approvedNo
360amnondominant desert, soil, mexico, guanajuato, cultivated environment2018-08-21v41 / 4approvedNo
360amnondominant desert, soil, state of california2018-08-21v41 / 4approvedNo
360amnondominant desert, soil, mexico, guanajuato2018-08-21v41 / 4approvedNo
360amnondominant agave, desert, state of california, agave deserti, leaf, leaf surface2018-08-21v41 / 6approvedNo
360amnondominant desert, soil, mexico, guanajuato, cultivated environment2018-08-21v41 / 6approvedNo
360amnondominant desert, soil, rhizosphere, agave, agave salmiana, mexico, guanajuato2018-08-21v41 / 9approvedNo
360amnondominant agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 10approvedNo
360amnondominant desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 12approvedNo
360amnondominant agave, desert, root endosphere, agave deserti, state of california, root2018-08-21v41 / 13approvedNo
360amnondominant agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root2018-08-21v41 / 13approvedNo
360amnondominant agave, desert, leaf, leaf surface, agave salmiana, mexico, guanajuato2018-08-21v41 / 14approvedNo
360amnondominant agave salmiana, agave, leaf, leaf endosphere, desert, guanajuato, mexico2018-08-21v41 / 15approvedNo
360amnondominant agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v41 / 16approvedNo
360amnondominant agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v41 / 17approvedNo
360amnondominant agave, agave deserti, leaf, leaf endosphere, desert, state of california2018-08-20v41 / 30approvedNo
360amnoncommon agave salmiana, agave, leaf, leaf endosphere, desert, guanajuato, mexico2018-08-21v41 / 39approvedNo
360amnoncommon agave, agave deserti, leaf, leaf endosphere, desert, state of california2018-08-20v41 / 48approvedNo
360amnoncommon agave, desert, root endosphere, agave deserti, state of california, root2018-08-21v41 / 52approvedNo
360amnoncommon agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v41 / 62approvedNo
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v41 / 78approvedNo
360amnoncommon agave, desert, root endosphere, agave salmiana, mexico, guanajuato, root2018-08-21v41 / 87approvedNo
360amnon high in spring compared to summer in desert mexico state of california soil rhizosphere 2018-08-21v41 / 97approvedNo
360amnoncommon desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 98approvedNo
360amnoncommon agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v41 / 210approvedNo
360amnon high in summer compared to spring in desert mexico state of california soil rhizosphere 2018-08-21v41 / 214approvedNo
360amnoncommon desert, soil, rhizosphere, agave, agave deserti, state of california2018-08-21v41 / 432approvedNo
360amnoncommon desert, soil, mexico, guanajuato2018-08-21v41 / 437approvedNo
360amnoncommon desert, soil, rhizosphere, agave, agave salmiana, mexico, guanajuato2018-08-21v41 / 484approvedNo
360amnoncommon agave, desert, leaf, leaf surface, agave salmiana, mexico, guanajuato2018-08-21v41 / 492approvedNo
360amnoncommon desert, soil, mexico, guanajuato, cultivated environment2018-08-21v41 / 500approvedNo
360amnon high in rhizosphere agave compared to soil in desert mexico state of california 2018-08-21v41 / 593approvedNo
360amnoncommon desert, soil, state of california2018-08-21v41 / 637approvedNo
360amnonhigher in leaf surface compared to soil in agave plants ( high in leaf leaf surface compared to soil in desert state of california mexico guanajuato agave )2018-08-21v41 / 645approvedNo
360amnoncommon agave, desert, state of california, agave deserti, leaf, leaf surface2018-08-21v41 / 649approvedNo
360amnon high in soil compared to agave rhizosphere in desert mexico state of california 2018-08-21v41 / 992approvedNo
360amnonlower in leaf surface compared to soil in agave plants ( high in soil compared to leaf leaf surface in desert state of california mexico guanajuato agave )2018-08-21v41 / 1108approvedNo

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