Experiment ID: 371

Field Description
namechanges in the gut microbiota of urban subjects during an immersion in the traditional diet and lifestyle of a rainforest village
sraerp110254
qiita11874
datamd579fa547ca866379fdb8575136fe033cc
mapmd5b9a4450f43e7e96edcb537032ebe3032

Annotations for experiment:

term enrichment score
TermScore
venezuela0.472727
amerindian0.472727
hunter gatherer0.382353
LOWER IN venezuela0.240000
LOWER IN amerindian0.240000
LOWER IN hunter gatherer0.214286
LOWER IN obsolete_juvenile stage0.111111
obsolete_juvenile stage0.111111
LOWER IN city0.078947
city0.078947
LOWER IN infant0.058824
infant0.058824
skin0.054054
saliva0.041096
adult0.011050
LOWER IN adult0.011050
LOWER IN united states of america0.007926
united states of america0.007926
homo sapiens0.007353
feces0.006316
Fraction of dbbact annotations with this term covered by the query
TermScore
venezuela0.333333
amerindian0.333333
LOWER IN venezuela0.333333
LOWER IN amerindian0.333333
hunter gatherer0.250000
LOWER IN hunter gatherer0.250000
LOWER IN obsolete_juvenile stage0.100000
obsolete_juvenile stage0.100000
LOWER IN city0.050000
city0.050000
LOWER IN infant0.038462
infant0.038462
skin0.030303
saliva0.021739
adult0.005780
LOWER IN adult0.005780
LOWER IN united states of america0.004049
united states of america0.004049
homo sapiens0.003690
feces0.003185
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
venezuela0.812500
amerindian0.812500
hunter gatherer0.812500
feces0.375000
saliva0.375000
skin0.250000
LOWER IN united states of america0.187500
LOWER IN city0.187500
united states of america0.187500
city0.187500
LOWER IN venezuela0.187500
LOWER IN amerindian0.187500
LOWER IN hunter gatherer0.187500
adult0.125000
LOWER IN infant0.125000
LOWER IN obsolete_juvenile stage0.125000
infant0.125000
obsolete_juvenile stage0.125000
LOWER IN adult0.125000
Exp. ID User ID Description Date Region Flag Sequences
371amnondominant feces, homo sapiens, venezuela, amerindian, hunter gatherer2018-09-06v4No1 / 11
371amnondominant homo sapiens, skin, venezuela, amerindian, hunter gatherer2018-09-06v4No1 / 14
371amnondominant homo sapiens, saliva, venezuela, amerindian, hunter gatherer2018-09-06v4No1 / 15
371amnonNEGATIVELY correlated with age in amerindians ( high in infant obsolete_juvenile stage compared to adult in feces homo sapiens venezuela amerindian hunter gatherer )2018-09-06v4No1 / 15
371amnonnegatively correlated with age in amerindian saliva ( high in infant obsolete_juvenile stage compared to adult in homo sapiens saliva venezuela amerindian hunter gatherer )2018-09-06v4No1 / 16
371amnonpositively correlated with age in amerindian saliva ( high in adult compared to infant obsolete_juvenile stage in homo sapiens saliva venezuela amerindian hunter gatherer )2018-09-06v4No1 / 17
371amnonhigher in saliva of amerindians compared to western visitors ( high in venezuela amerindian hunter gatherer compared to united states of america city in homo sapiens saliva )2018-09-06v4No1 / 24
371amnonpositively correlated with age in amerindians ( high in adult compared to infant obsolete_juvenile stage in feces homo sapiens venezuela amerindian hunter gatherer )2018-09-06v4No1 / 27
371amnoncommon homo sapiens, saliva, venezuela, amerindian, hunter gatherer2018-09-06v4No1 / 43
371amnonlower in saliva of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens saliva )2018-09-06v4No1 / 60
371amnoncommon feces, homo sapiens, venezuela, amerindian, hunter gatherer2018-09-06v4No1 / 121
371amnonlower in skin of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens skin )2018-09-06v4No1 / 195
371amnoncommon homo sapiens, skin, venezuela, amerindian, hunter gatherer2018-09-06v4No1 / 195
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in feces homo sapiens )2018-09-06v4No1 / 417
371amnonhigher in amerindians compared to western visitors ( high in venezuela amerindian hunter gatherer compared to united states of america city in feces homo sapiens )2018-09-06v4No1 / 443
371amnonhigher in skin of amerindians compared to western visitors ( high in venezuela amerindian hunter gatherer compared to united states of america city in homo sapiens skin )2018-09-06v4No1 / 854

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