Experiment ID: 371

Field Description
namechanges in the gut microbiota of urban subjects during an immersion in the traditional diet and lifestyle of a rainforest village
sraerp110254
qiita11874
datamd579fa547ca866379fdb8575136fe033cc
mapmd5b9a4450f43e7e96edcb537032ebe3032

Annotations for experiment:

term enrichment score
TermScore
venezuela0.472727
amerindian0.472727
hunter gatherer0.382353
LOWER IN amerindian0.272727
LOWER IN hunter gatherer0.272727
LOWER IN venezuela0.272727
LOWER IN obsolete_juvenile stage0.181818
LOWER IN city0.162162
LOWER IN infant0.142857
LOWER IN united states of america0.130435
obsolete_juvenile stage0.111111
city0.082192
infant0.068966
LOWER IN adult0.064516
skin0.058824
saliva0.051724
adult0.013333
united states of america0.008646
homo sapiens0.008475
feces0.007229
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN amerindian0.500000
LOWER IN hunter gatherer0.500000
LOWER IN venezuela0.500000
venezuela0.333333
amerindian0.333333
LOWER IN obsolete_juvenile stage0.333333
hunter gatherer0.250000
LOWER IN infant0.166667
LOWER IN city0.142857
LOWER IN united states of america0.100000
obsolete_juvenile stage0.100000
city0.052632
infant0.047619
LOWER IN adult0.043478
skin0.033333
saliva0.027778
adult0.007042
united states of america0.004425
homo sapiens0.004255
feces0.003650
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
venezuela0.812500
hunter gatherer0.812500
amerindian0.812500
feces0.375000
saliva0.375000
skin0.250000
LOWER IN city0.187500
LOWER IN united states of america0.187500
united states of america0.187500
city0.187500
LOWER IN amerindian0.187500
LOWER IN hunter gatherer0.187500
LOWER IN venezuela0.187500
adult0.125000
LOWER IN infant0.125000
LOWER IN obsolete_juvenile stage0.125000
obsolete_juvenile stage0.125000
infant0.125000
LOWER IN adult0.125000
Exp. ID User ID Description Date Region Flag Sequences
371amnondominant feces, homo sapiens, hunter gatherer, amerindian, venezuela2018-09-06v4No1 / 3
371amnondominant homo sapiens, skin, amerindian, hunter gatherer, venezuela2018-09-06v4No1 / 6
371amnonNEGATIVELY correlated with age in amerindians ( high in infant obsolete_juvenile stage compared to adult in feces homo sapiens venezuela hunter gatherer amerindian )2018-09-06v4No1 / 7
371amnondominant homo sapiens, venezuela, hunter gatherer, amerindian, saliva2018-09-06v4No1 / 7
371amnonnegatively correlated with age in amerindian saliva ( high in obsolete_juvenile stage infant compared to adult in homo sapiens venezuela hunter gatherer amerindian saliva )2018-09-06v4No1 / 8
371amnonpositively correlated with age in amerindian saliva ( high in adult compared to obsolete_juvenile stage infant in homo sapiens venezuela hunter gatherer amerindian saliva )2018-09-06v4No1 / 9
371amnonhigher in saliva of amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in homo sapiens saliva )2018-09-06v4No1 / 16
371amnonpositively correlated with age in amerindians ( high in adult compared to infant obsolete_juvenile stage in feces homo sapiens venezuela hunter gatherer amerindian )2018-09-06v4No1 / 19
371amnoncommon homo sapiens, venezuela, hunter gatherer, amerindian, saliva2018-09-06v4No1 / 35
371amnonlower in saliva of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens saliva )2018-09-06v4No1 / 52
371amnoncommon feces, homo sapiens, hunter gatherer, amerindian, venezuela2018-09-06v4No1 / 113
371amnoncommon homo sapiens, skin, amerindian, hunter gatherer, venezuela2018-09-06v4No1 / 187
371amnonlower in skin of amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in homo sapiens skin )2018-09-06v4No1 / 187
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to amerindian hunter gatherer venezuela in feces homo sapiens )2018-09-06v4No1 / 409
371amnonhigher in amerindians compared to western visitors ( high in hunter gatherer amerindian venezuela compared to city united states of america in feces homo sapiens )2018-09-06v4No1 / 435
371amnonhigher in skin of amerindians compared to western visitors ( high in venezuela hunter gatherer amerindian compared to city united states of america in homo sapiens skin )2018-09-06v4No1 / 846

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