Experiment ID: 378

Field Description
namedo different probing depths exhibit striking differences in microbial profiles?
sraprjna324274
datamd53fffaad567f6e07ad22c849efdc6bbcb
mapmd560f24a28225ca71549db130794768eb9

Annotations for experiment:

term enrichment score
TermScore
depth < 3mm0.500000
shallow pocket depth0.500000
depth > 3mm0.375000
deep pocket depth0.375000
periodontitis0.368421
LOWER IN depth &lt; 3mm0.166667
LOWER IN shallow pocket depth0.166667
LOWER IN depth &gt; 3mm0.166667
LOWER IN deep pocket depth0.166667
LOWER IN periodontitis0.142857
subgingival plaque0.133333
brazil0.100000
dentition0.083333
mouth0.080000
adult0.011494
control0.010619
LOWER IN control0.010256
homo sapiens0.007353
Fraction of dbbact annotations with this term covered by the query
TermScore
depth < 3mm0.500000
shallow pocket depth0.500000
depth > 3mm0.500000
deep pocket depth0.500000
LOWER IN depth &lt; 3mm0.500000
LOWER IN shallow pocket depth0.500000
LOWER IN depth &gt; 3mm0.500000
LOWER IN deep pocket depth0.500000
periodontitis0.250000
LOWER IN periodontitis0.250000
subgingival plaque0.071429
brazil0.052632
dentition0.043478
mouth0.041667
adult0.005780
control0.005405
LOWER IN control0.005405
homo sapiens0.003690
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
dentition1.000000
adult1.000000
brazil1.000000
subgingival plaque1.000000
mouth1.000000
periodontitis0.700000
depth < 3mm0.500000
shallow pocket depth0.500000
depth > 3mm0.300000
deep pocket depth0.300000
control0.300000
LOWER IN depth &lt; 3mm0.100000
LOWER IN shallow pocket depth0.100000
LOWER IN depth &gt; 3mm0.100000
LOWER IN deep pocket depth0.100000
LOWER IN periodontitis0.100000
LOWER IN control0.100000
Exp. ID User ID Description Date Region Flag Sequences
378amnon high in periodontitis compared to control in homo sapiens dentition adult brazil subgingival plaque mouth 2018-09-14v4No1 / 7
378amnon high in control compared to periodontitis in homo sapiens dentition adult brazil subgingival plaque mouth 2018-09-14v4No1 / 10
378amnondominant homo sapiens, control, dentition, adult, brazil, subgingival plaque, depth < 3mm, shallow pocket depth, mouth2018-09-14v4No1 / 15
378amnondominant homo sapiens, dentition, adult, brazil, subgingival plaque, depth < 3mm, shallow pocket depth, mouth, periodontitis2018-09-14v4No1 / 22
378amnondominant homo sapiens, dentition, adult, brazil, subgingival plaque, depth > 3mm, deep pocket depth, mouth, periodontitis2018-09-14v4No1 / 24
378amnon high in depth < 3mm shallow pocket depth compared to depth > 3mm deep pocket depth in homo sapiens dentition adult brazil subgingival plaque mouth periodontitis 2018-09-13v4No1 / 28
378amnon high in depth > 3mm deep pocket depth compared to depth < 3mm shallow pocket depth in homo sapiens dentition adult brazil subgingival plaque mouth periodontitis 2018-09-13v4No1 / 40
378amnoncommon homo sapiens, control, dentition, adult, brazil, subgingival plaque, depth < 3mm, shallow pocket depth, mouth2018-09-14v4No1 / 69
378amnoncommon homo sapiens, dentition, adult, brazil, subgingival plaque, depth > 3mm, deep pocket depth, mouth, periodontitis2018-09-14v4No1 / 80
378amnoncommon homo sapiens, dentition, adult, brazil, subgingival plaque, depth < 3mm, shallow pocket depth, mouth, periodontitis2018-09-14v4No1 / 84

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