Experiment ID: 378

Field Description
namedo different probing depths exhibit striking differences in microbial profiles?
sraprjna324274
datamd53fffaad567f6e07ad22c849efdc6bbcb
mapmd560f24a28225ca71549db130794768eb9

Annotations for experiment:

term enrichment score
TermScore
shallow pocket depth0.500000
depth < 3mm0.500000
depth > 3mm0.375000
deep pocket depth0.375000
periodontitis0.212121
subgingival plaque0.200000
brazil0.166667
dentition0.166667
LOWER IN shallow pocket depth0.166667
LOWER IN depth < 3mm0.166667
LOWER IN depth > 3mm0.166667
LOWER IN deep pocket depth0.166667
LOWER IN periodontitis0.111111
mouth0.100000
adult0.033898
control0.018462
LOWER IN control0.017699
homo sapiens0.015152
Fraction of dbbact annotations with this term covered by the query
TermScore
shallow pocket depth0.500000
depth < 3mm0.500000
depth > 3mm0.500000
deep pocket depth0.500000
LOWER IN shallow pocket depth0.500000
LOWER IN depth < 3mm0.500000
LOWER IN depth > 3mm0.500000
LOWER IN deep pocket depth0.500000
periodontitis0.125000
LOWER IN periodontitis0.125000
subgingival plaque0.111111
brazil0.090909
dentition0.090909
mouth0.052632
adult0.017241
LOWER IN control0.009709
control0.009524
homo sapiens0.007634
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
brazil1.000000
mouth1.000000
subgingival plaque1.000000
dentition1.000000
adult1.000000
periodontitis0.700000
shallow pocket depth0.500000
depth < 3mm0.500000
depth > 3mm0.300000
deep pocket depth0.300000
control0.300000
LOWER IN shallow pocket depth0.100000
LOWER IN depth < 3mm0.100000
LOWER IN depth > 3mm0.100000
LOWER IN deep pocket depth0.100000
LOWER IN periodontitis0.100000
LOWER IN control0.100000
Exp. ID User ID Description Date Sequences
378amnon high in periodontitis compared to control in homo sapiens brazil mouth subgingival plaque dentition adult 2018-09-141 / 7
378amnon high in control compared to periodontitis in homo sapiens brazil mouth subgingival plaque dentition adult 2018-09-141 / 10
378amnonhighfreq homo sapiens, brazil, mouth, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, control2018-09-141 / 15
378amnonhighfreq homo sapiens, brazil, mouth, subgingival plaque, dentition, adult, periodontitis, shallow pocket depth, depth < 3mm2018-09-141 / 22
378amnonhighfreq homo sapiens, brazil, mouth, subgingival plaque, dentition, adult, periodontitis, depth > 3mm, deep pocket depth2018-09-141 / 24
378amnon high in depth < 3mm shallow pocket depth compared to depth > 3mm deep pocket depth in homo sapiens brazil mouth subgingival plaque dentition periodontitis adult 2018-09-131 / 28
378amnon high in deep pocket depth depth > 3mm compared to shallow pocket depth depth < 3mm in homo sapiens brazil mouth subgingival plaque dentition periodontitis adult 2018-09-131 / 40
378amnoncommon homo sapiens, brazil, mouth, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, control2018-09-141 / 69
378amnoncommon homo sapiens, brazil, mouth, subgingival plaque, dentition, adult, periodontitis, depth > 3mm, deep pocket depth2018-09-141 / 80
378amnoncommon homo sapiens, brazil, mouth, subgingival plaque, dentition, adult, periodontitis, shallow pocket depth, depth < 3mm2018-09-141 / 84

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