Experiment ID: 384

Field Description
namelung microbiome is influenced by the environment and asthmatic status in an equine model of asthma
sraprjna361129
datamd5cd1c3e9f464bd8427203de5bb5d0eb49
mapmd5820751cade1bb170934aac508c58283e

Annotations for experiment:

term enrichment score
TermScore
barn0.500000
hay0.400000
pasture0.352941
LOWER IN barn0.200000
equus caballus0.200000
horse0.200000
LOWER IN hay0.181818
LOWER IN pasture0.181818
nasal cavity0.150538
pair of nares0.122807
oral cavity0.122807
LOWER IN asthma0.111111
asthma0.111111
mouth0.077586
canada0.076923
LOWER IN nasal cavity0.074074
LOWER IN oral cavity0.066667
LOWER IN pair of nares0.066667
farm0.054054
LOWER IN mouth0.050000
saliva0.041860
LOWER IN saliva0.032258
control0.009950
LOWER IN control0.009950
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN barn0.500000
barn0.500000
LOWER IN asthma0.500000
asthma0.500000
pasture0.333333
LOWER IN hay0.333333
hay0.333333
LOWER IN pasture0.333333
equus caballus0.111111
horse0.111111
nasal cavity0.090909
LOWER IN nasal cavity0.090909
pair of nares0.071429
LOWER IN oral cavity0.071429
oral cavity0.071429
LOWER IN pair of nares0.071429
LOWER IN mouth0.041667
mouth0.041667
canada0.040000
farm0.027778
LOWER IN saliva0.021739
saliva0.021739
control0.005405
LOWER IN control0.005405
Fraction of annotations for the query sequences containing the term
TermScore
farm1.000000
equus caballus1.000000
canada1.000000
horse1.000000
saliva0.562500
mouth0.562500
hay0.500000
barn0.500000
nasal cavity0.437500
pair of nares0.437500
oral cavity0.437500
pasture0.375000
LOWER IN hay0.125000
LOWER IN barn0.125000
LOWER IN pasture0.125000
LOWER IN saliva0.062500
LOWER IN oral cavity0.062500
LOWER IN mouth0.062500
LOWER IN nasal cavity0.062500
LOWER IN pair of nares0.062500
control0.062500
LOWER IN asthma0.062500
asthma0.062500
LOWER IN control0.062500
Exp. ID User ID Description Date Region Flag Sequences
384amnon high in asthma compared to control in farm hay saliva oral cavity equus caballus canada horse barn mouth 2018-10-23v4No1 / 1
384amnon high in control compared to asthma in farm hay saliva oral cavity equus caballus canada horse barn mouth 2018-10-23v4No1 / 6
384amnondominant farm, hay, nasal cavity, pair of nares, equus caballus, canada, horse, barn2018-10-22v4No1 / 11
384amnondominant farm, pasture, nasal cavity, pair of nares, equus caballus, canada, horse2018-10-22v4No1 / 14
384amnondominant farm, hay, saliva, oral cavity, equus caballus, canada, horse, barn, mouth2018-10-22v4No1 / 15
384amnondominant farm, pasture, saliva, oral cavity, equus caballus, canada, horse, mouth2018-10-22v4No1 / 18
384amnoncommon farm, hay, nasal cavity, pair of nares, equus caballus, canada, horse, barn2018-10-22v4No1 / 131
384amnon high in hay barn compared to pasture in farm nasal cavity pair of nares equus caballus canada horse 2018-10-22v4No1 / 161
384amnoncommon farm, pasture, nasal cavity, pair of nares, equus caballus, canada, horse2018-10-22v4No1 / 175
384amnoncommon farm, pasture, saliva, oral cavity, equus caballus, canada, horse, mouth2018-10-22v4No1 / 201
384amnon high in pasture compared to hay barn in farm saliva equus caballus canada horse mouth 2018-10-22v4No1 / 245
384amnoncommon farm, hay, saliva, oral cavity, equus caballus, canada, horse, barn, mouth2018-10-22v4No1 / 274
384amnon high in hay barn compared to pasture in farm saliva equus caballus canada horse mouth 2018-10-22v4No1 / 283
384amnon high in pasture compared to hay barn in farm nasal cavity pair of nares equus caballus canada horse 2018-10-22v4No1 / 304
384amnon high in saliva oral cavity mouth compared to nasal cavity pair of nares in farm equus caballus canada horse 2018-10-22v4No1 / 604
384amnon high in nasal cavity pair of nares compared to saliva oral cavity mouth in farm equus caballus canada horse 2018-10-22v4No1 / 791

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