Experiment ID: 384

Field Description
namelung microbiome is influenced by the environment and asthmatic status in an equine model of asthma
sraprjna361129
datamd5cd1c3e9f464bd8427203de5bb5d0eb49
mapmd5820751cade1bb170934aac508c58283e

Annotations for experiment:

term enrichment score
TermScore
horse0.500000
barn0.500000
hay0.500000
equus caballus0.400000
pasture0.352941
oral cavity0.241379
LOWER IN barn0.200000
LOWER IN hay0.200000
LOWER IN pasture0.200000
pair of nares0.177215
nasal cavity0.177215
canada0.153846
LOWER IN oral cavity0.111111
LOWER IN asthma0.111111
asthma0.111111
LOWER IN nasal cavity0.105263
LOWER IN pair of nares0.100000
farm0.095238
mouth0.091837
LOWER IN mouth0.086957
saliva0.084112
LOWER IN saliva0.083333
LOWER IN control0.015625
control0.015504
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN oral cavity0.500000
LOWER IN barn0.500000
LOWER IN hay0.500000
barn0.500000
hay0.500000
LOWER IN pasture0.500000
LOWER IN asthma0.500000
asthma0.500000
horse0.333333
LOWER IN nasal cavity0.333333
pasture0.333333
equus caballus0.250000
LOWER IN pair of nares0.250000
oral cavity0.166667
LOWER IN mouth0.142857
LOWER IN saliva0.125000
pair of nares0.111111
nasal cavity0.111111
canada0.083333
farm0.050000
mouth0.050000
saliva0.045455
LOWER IN control0.008929
control0.008850
Fraction of annotations for the query sequences containing the term
TermScore
equus caballus1.000000
horse1.000000
canada1.000000
farm1.000000
mouth0.562500
saliva0.562500
barn0.500000
hay0.500000
pair of nares0.437500
nasal cavity0.437500
oral cavity0.437500
pasture0.375000
LOWER IN barn0.125000
LOWER IN hay0.125000
LOWER IN pasture0.125000
LOWER IN oral cavity0.062500
LOWER IN mouth0.062500
LOWER IN saliva0.062500
LOWER IN pair of nares0.062500
LOWER IN nasal cavity0.062500
control0.062500
LOWER IN asthma0.062500
asthma0.062500
LOWER IN control0.062500
Exp. ID User ID Description Date Sequences
384amnon high in asthma compared to control in equus caballus horse canada farm oral cavity mouth saliva hay barn 2018-10-231 / 1
384amnon high in control compared to asthma in equus caballus horse canada farm oral cavity mouth saliva hay barn 2018-10-231 / 6
384amnonhighfreq equus caballus, horse, canada, farm, nasal cavity, pair of nares, barn, hay2018-10-221 / 11
384amnonhighfreq equus caballus, horse, canada, farm, nasal cavity, pair of nares, pasture2018-10-221 / 14
384amnonhighfreq equus caballus, horse, canada, farm, barn, hay, mouth, oral cavity, saliva2018-10-221 / 15
384amnonhighfreq equus caballus, horse, canada, farm, mouth, oral cavity, saliva, pasture2018-10-221 / 18
384amnoncommon equus caballus, horse, canada, farm, nasal cavity, pair of nares, barn, hay2018-10-221 / 131
384amnon high in barn hay compared to pasture in equus caballus horse canada farm nasal cavity pair of nares 2018-10-221 / 161
384amnoncommon equus caballus, horse, canada, farm, nasal cavity, pair of nares, pasture2018-10-221 / 175
384amnoncommon equus caballus, horse, canada, farm, mouth, oral cavity, saliva, pasture2018-10-221 / 201
384amnon high in pasture compared to barn hay in equus caballus horse canada farm mouth saliva 2018-10-221 / 245
384amnoncommon equus caballus, horse, canada, farm, barn, hay, mouth, oral cavity, saliva2018-10-221 / 274
384amnon high in barn hay compared to pasture in equus caballus horse canada farm mouth saliva 2018-10-221 / 283
384amnon high in pasture compared to barn hay in equus caballus horse canada farm nasal cavity pair of nares 2018-10-221 / 304
384amnon high in mouth oral cavity saliva compared to pair of nares nasal cavity in equus caballus horse canada farm 2018-10-221 / 604
384amnon high in pair of nares nasal cavity compared to oral cavity mouth saliva in equus caballus horse canada farm 2018-10-221 / 791

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