Experiment ID: 384

Field Description
namelung microbiome is influenced by the environment and asthmatic status in an equine model of asthma
sraprjna361129
datamd5cd1c3e9f464bd8427203de5bb5d0eb49
mapmd5820751cade1bb170934aac508c58283e

Annotations for experiment:

term enrichment score
TermScore
canada0.500000
barn0.500000
hay0.500000
pasture0.352941
horse0.250000
equus caballus0.222222
oral cavity0.215385
LOWER IN barn0.200000
LOWER IN hay0.200000
LOWER IN pasture0.200000
nasal cavity0.162791
pair of nares0.140000
LOWER IN oral cavity0.111111
LOWER IN asthma0.111111
asthma0.111111
LOWER IN nasal cavity0.105263
LOWER IN pair of nares0.095238
LOWER IN mouth0.086957
mouth0.084112
LOWER IN saliva0.074074
farm0.066667
saliva0.059211
LOWER IN control0.012579
control0.012500
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN oral cavity0.500000
LOWER IN barn0.500000
LOWER IN hay0.500000
barn0.500000
hay0.500000
LOWER IN pasture0.500000
LOWER IN asthma0.500000
asthma0.500000
canada0.333333
LOWER IN nasal cavity0.333333
pasture0.333333
LOWER IN pair of nares0.200000
horse0.142857
LOWER IN mouth0.142857
oral cavity0.142857
equus caballus0.125000
nasal cavity0.100000
LOWER IN saliva0.090909
pair of nares0.083333
mouth0.045455
farm0.034483
saliva0.031250
LOWER IN control0.006993
control0.006944
Fraction of annotations for the query sequences containing the term
TermScore
equus caballus1.000000
horse1.000000
canada1.000000
farm1.000000
saliva0.562500
mouth0.562500
barn0.500000
hay0.500000
pair of nares0.437500
nasal cavity0.437500
oral cavity0.437500
pasture0.375000
LOWER IN barn0.125000
LOWER IN hay0.125000
LOWER IN pasture0.125000
LOWER IN oral cavity0.062500
LOWER IN saliva0.062500
LOWER IN mouth0.062500
LOWER IN pair of nares0.062500
LOWER IN nasal cavity0.062500
control0.062500
LOWER IN asthma0.062500
LOWER IN control0.062500
asthma0.062500
Exp. ID User ID Description Date Region Flag Sequences
384amnon high in asthma compared to control in equus caballus horse canada farm oral cavity saliva hay barn mouth 2018-10-23v4No1 / 0
384amnon high in control compared to asthma in equus caballus horse canada farm oral cavity saliva hay barn mouth 2018-10-23v4No1 / 5
384amnondominant equus caballus, horse, canada, farm, nasal cavity, pair of nares, barn, hay2018-10-22v4No1 / 10
384amnondominant equus caballus, horse, canada, farm, nasal cavity, pair of nares, pasture2018-10-22v4No1 / 13
384amnondominant equus caballus, horse, canada, farm, barn, hay, oral cavity, saliva, mouth2018-10-22v4No1 / 14
384amnondominant equus caballus, horse, canada, farm, oral cavity, saliva, pasture, mouth2018-10-22v4No1 / 17
384amnoncommon equus caballus, horse, canada, farm, nasal cavity, pair of nares, barn, hay2018-10-22v4No1 / 130
384amnon high in barn hay compared to pasture in equus caballus horse canada farm nasal cavity pair of nares 2018-10-22v4No1 / 160
384amnoncommon equus caballus, horse, canada, farm, nasal cavity, pair of nares, pasture2018-10-22v4No1 / 174
384amnoncommon equus caballus, horse, canada, farm, oral cavity, saliva, pasture, mouth2018-10-22v4No1 / 200
384amnon high in pasture compared to barn hay in equus caballus horse canada farm saliva mouth 2018-10-22v4No1 / 244
384amnoncommon equus caballus, horse, canada, farm, barn, hay, oral cavity, saliva, mouth2018-10-22v4No1 / 273
384amnon high in barn hay compared to pasture in equus caballus horse canada farm saliva mouth 2018-10-22v4No1 / 282
384amnon high in pasture compared to barn hay in equus caballus horse canada farm nasal cavity pair of nares 2018-10-22v4No1 / 303
384amnon high in oral cavity saliva mouth compared to pair of nares nasal cavity in equus caballus horse canada farm 2018-10-22v4No1 / 603
384amnon high in pair of nares nasal cavity compared to oral cavity saliva mouth in equus caballus horse canada farm 2018-10-22v4No1 / 790

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