dbBact

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Experiment ID: 39

Field	Description
name	influence of whole-wheat consumption on fecal microbial ecology of obese diabetic mice
sra	srp058568
sra	prjna281761
datamd5	f09d32302e618f56bebf75534cdd4849
mapmd5	c0dd6f790db1854741630de8fb7a3218

Annotations for experiment:

term enrichment score

Term	Score
LOWER IN whole wheat diet	0.333333
whole grain diet	0.333333
obesity	0.250000
normal diet	0.222222
LOWER IN normal diet	0.222222
LOWER IN diet	0.054054
diet	0.054054
mus musculus	0.031250
research facility	0.013514
control	0.010582
feces	0.006349

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN whole wheat diet	0.500000
whole grain diet	0.500000
normal diet	0.200000
LOWER IN normal diet	0.200000
obesity	0.142857
LOWER IN diet	0.030303
diet	0.030303
mus musculus	0.015873
research facility	0.006803
control	0.005405
feces	0.003185

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
research facility	1.000000
mus musculus	1.000000
obesity	1.000000
control	0.250000
normal diet	0.250000
LOWER IN diet	0.250000
LOWER IN whole wheat diet	0.250000
diet	0.250000
whole grain diet	0.250000
LOWER IN normal diet	0.250000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
39	amnon	high freq. in obsese lepr-db mice (dominant feces, research facility, mus musculus, obesity)	2016-12-09	v4	No	1 / 18
39	amnon	higer in obese mice eating whole grain diet compared to normal chow ( high in diet whole grain diet compared to normal diet in feces research facility mus musculus obesity )	2016-12-09	v4	No	1 / 71
39	amnon	lower in whole wheat diet compared to normal chow ( high in control normal diet compared to diet whole wheat diet in feces research facility mus musculus obesity )	2016-12-09	v4	No	1 / 83
39	amnon	common in obese lepr-db mice (common feces, research facility, mus musculus, obesity)	2016-12-09	v4	No	1 / 132

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