Experiment ID: 399

Field Description
namegut microbiota density influences host physiology and is shaped by host and microbial factors
sraprjna413199
datamd58bcd1d2307f9b6cc59dbbf639199e251
mapmd5459447b47c990bc5f91d513e3c1bfab2

Annotations for experiment:

term enrichment score
TermScore
state of tennessee0.262295
zoological garden0.113475
LOWER IN antibiotic0.093458
antibiotic0.089286
african elephant0.086957
ailurus fulgens0.086957
red panda0.086957
mustela putorius furo0.086957
ferret0.086957
rabbit0.083333
macaque0.083333
loxodonta africana0.083333
panthera leo0.083333
lion0.083333
pan troglodytes0.080000
chimpanzee0.080000
macaca mulatta0.074074
gorilla gorilla0.074074
oryctolagus cuniculus0.071429
LOWER IN ulcerative colitis0.068966
ulcerative colitis0.066667
sheep0.064516
rattus norvegicus0.064516
LOWER IN crohn's disease0.062500
ovis aries0.060606
crohn's disease0.060606
sus scrofa0.054054
pig0.054054
rat0.054054
dog0.046512
LOWER IN clindamycin0.045455
LOWER IN ciprofloxacin0.045455
ciprofloxacin0.045455
clindamycin0.045455
vancomycin0.044444
LOWER IN ampicillin0.043478
LOWER IN vancomycin0.043478
canis lupus familiaris0.042553
ampicillin0.042553
metronidazole0.041667
LOWER IN metronidazole0.040816
mouse0.034188
mus musculus0.030534
research facility0.013734
LOWER IN control0.011364
control0.011236
united states of america0.008264
homo sapiens0.007463
feces0.006579
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN clindamycin0.500000
african elephant0.500000
LOWER IN ciprofloxacin0.500000
ciprofloxacin0.500000
ailurus fulgens0.500000
red panda0.500000
mustela putorius furo0.500000
ferret0.500000
clindamycin0.500000
rabbit0.333333
macaque0.333333
loxodonta africana0.333333
panthera leo0.333333
lion0.333333
vancomycin0.333333
pan troglodytes0.250000
chimpanzee0.250000
LOWER IN ampicillin0.250000
LOWER IN vancomycin0.250000
state of tennessee0.200000
ampicillin0.200000
macaca mulatta0.166667
gorilla gorilla0.166667
metronidazole0.166667
oryctolagus cuniculus0.142857
LOWER IN metronidazole0.142857
LOWER IN ulcerative colitis0.125000
ulcerative colitis0.111111
sheep0.100000
rattus norvegicus0.100000
LOWER IN crohn's disease0.090909
ovis aries0.083333
crohn's disease0.083333
LOWER IN antibiotic0.076923
antibiotic0.071429
zoological garden0.066667
sus scrofa0.062500
pig0.062500
rat0.062500
dog0.045455
canis lupus familiaris0.038462
mouse0.018182
mus musculus0.016129
research facility0.006993
LOWER IN control0.005882
control0.005814
united states of america0.004149
homo sapiens0.003831
feces0.003300
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
research facility0.380952
zoological garden0.380952
state of tennessee0.380952
mouse0.285714
mus musculus0.285714
control0.166667
LOWER IN control0.166667
homo sapiens0.142857
LOWER IN antibiotic0.119048
antibiotic0.119048
oryctolagus cuniculus0.047619
rabbit0.047619
ovis aries0.047619
sheep0.047619
pan troglodytes0.047619
chimpanzee0.047619
macaca mulatta0.047619
macaque0.047619
gorilla gorilla0.047619
LOWER IN crohn's disease0.047619
sus scrofa0.047619
pig0.047619
loxodonta africana0.047619
african elephant0.047619
rat0.047619
rattus norvegicus0.047619
LOWER IN ulcerative colitis0.047619
canis lupus familiaris0.047619
dog0.047619
panthera leo0.047619
lion0.047619
ulcerative colitis0.047619
crohn's disease0.047619
ailurus fulgens0.047619
red panda0.047619
mustela putorius furo0.047619
ferret0.047619
LOWER IN clindamycin0.023810
LOWER IN ampicillin0.023810
LOWER IN vancomycin0.023810
LOWER IN ciprofloxacin0.023810
LOWER IN metronidazole0.023810
ciprofloxacin0.023810
ampicillin0.023810
vancomycin0.023810
metronidazole0.023810
clindamycin0.023810
Exp. ID User ID Description Date Region Flag Sequences
399amnon high in crohn's disease compared to ulcerative colitis in feces united states of america homo sapiens 2018-11-16v4No1 / 3
399amnonhigher in vancomycin treated mice compared to controls ( high in antibiotic vancomycin compared to control in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 5
399amnonhigher in metronidazole treated mice compared to controls ( high in antibiotic metronidazole compared to control in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 5
399amnonhigher in clindamycin treated mice compared to controls ( high in clindamycin antibiotic compared to control in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 5
399amnonhigher in ampicillin treated mice compared to controls ( high in ampicillin antibiotic compared to control in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 8
399amnondominant feces, united states of america, zoological garden, state of tennessee, ailurus fulgens, red panda2018-11-16v4No1 / 9
399amnondominant feces, united states of america, mustela putorius furo, ferret2018-11-16v4No1 / 9
399amnondominant feces, united states of america, zoological garden, state of tennessee, gorilla gorilla2018-11-16v4No1 / 11
399amnondominant feces, united states of america, research facility, mouse, mus musculus2018-11-18v4No1 / 12
399amnondominant feces, united states of america, zoological garden, state of tennessee, ovis aries, sheep2018-11-16v4No1 / 13
399amnondominant feces, united states of america, zoological garden, state of tennessee, sus scrofa, pig2018-11-16v4No1 / 13
399amnondominant feces, united states of america, oryctolagus cuniculus, rabbit, research facility2018-11-16v4No1 / 14
399amnondominant pan troglodytes, chimpanzee, zoological garden, feces, united states of america, state of tennessee2018-11-16v4No1 / 16
399amnoncommon feces, united states of america, mustela putorius furo, ferret2018-11-16v4No1 / 20
399amnondominant feces, united states of america, canis lupus familiaris, dog2018-11-16v4No1 / 20
399amnondominant feces, united states of america, zoological garden, state of tennessee, macaca mulatta, macaque2018-11-16v4No1 / 21
399amnoncommon feces, united states of america, zoological garden, state of tennessee, ailurus fulgens, red panda2018-11-16v4No1 / 22
399amnondominant feces, united states of america, zoological garden, panthera leo, lion, state of tennessee2018-11-16v4No1 / 23
399amnon high in crohn's disease compared to control in feces united states of america homo sapiens 2018-11-16v4No1 / 27
399amnondominant feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 27
399amnondominant feces, united states of america, loxodonta africana, african elephant, zoological garden, state of tennessee2018-11-16v4No1 / 28
399amnon high in ulcerative colitis compared to control in feces united states of america homo sapiens 2018-11-16v4No1 / 36
399amnon high in ulcerative colitis compared to crohn's disease in feces united states of america homo sapiens 2018-11-16v4No1 / 47
399amnonhigher in ciprofloxacin treated mice compared to controls ( high in ciprofloxacin antibiotic compared to control in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 60
399amnoncommon feces, united states of america, zoological garden, panthera leo, lion, state of tennessee2018-11-16v4No1 / 79
399amnoncommon feces, united states of america, research facility, mouse, mus musculus2018-11-18v4No1 / 89
399amnoncommon feces, united states of america, canis lupus familiaris, dog2018-11-16v4No1 / 108
399amnonlower in metronidazole treated mice compared to controls ( high in control compared to antibiotic metronidazole in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 127
399amnonlower in ciprofloxacin treated mice compared to controls ( high in control compared to ciprofloxacin antibiotic in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 136
399amnon high in control compared to ulcerative colitis in feces united states of america homo sapiens 2018-11-16v4No1 / 180
399amnoncommon feces, united states of america, research facility, rat, rattus norvegicus2018-11-16v4No1 / 184
399amnonlower in vancomycin treated mice compared to controls ( high in control compared to antibiotic vancomycin in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 225
399amnoncommon feces, united states of america, loxodonta africana, african elephant, zoological garden, state of tennessee2018-11-16v4No1 / 252
399amnonlower in ampicillin treated mice compared to controls ( high in control compared to ampicillin antibiotic in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 263
399amnoncommon feces, united states of america, zoological garden, state of tennessee, sus scrofa, pig2018-11-16v4No1 / 319
399amnon high in control compared to crohn's disease in feces united states of america homo sapiens 2018-11-16v4No1 / 390
399amnonlower in clindamycin treated mice compared to controls ( high in control compared to clindamycin antibiotic in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 394
399amnoncommon feces, united states of america, zoological garden, state of tennessee, gorilla gorilla2018-11-16v4No1 / 395
399amnoncommon feces, united states of america, zoological garden, state of tennessee, macaca mulatta, macaque2018-11-16v4No1 / 404
399amnoncommon pan troglodytes, chimpanzee, zoological garden, feces, united states of america, state of tennessee2018-11-16v4No1 / 407
399amnoncommon feces, united states of america, zoological garden, state of tennessee, ovis aries, sheep2018-11-16v4No1 / 451
399amnoncommon feces, united states of america, oryctolagus cuniculus, rabbit, research facility2018-11-16v4No1 / 577

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