Experiment ID: 400

Field Description
nameus immigration westernizes the human gut microbiome
sraprjeb28687
datamd540c0ce1b6815815e744fc170d8a379b8
mapmd5e8215641b4960b1727ffde73a840e12c

Annotations for experiment:

term enrichment score
TermScore
thailand0.562500
hmong0.363636
karen0.300000
myanmar0.300000
LOWER IN hmong0.222222
rural community0.171429
LOWER IN united states of america0.133333
LOWER IN thailand0.125000
LOWER IN karen0.125000
LOWER IN myanmar0.125000
LOWER IN hmong 2nd generation0.125000
hmong 2nd generation0.125000
LOWER IN china0.111111
LOWER IN rural community0.105263
low bmi0.100000
LOWER IN low bmi0.100000
LOWER IN high bmi0.095238
high bmi0.090909
female0.056604
adult0.025397
china0.022059
homo sapiens0.012658
united states of america0.010554
feces0.009901
Fraction of dbbact annotations with this term covered by the query
TermScore
thailand0.500000
LOWER IN thailand0.500000
karen0.500000
myanmar0.500000
LOWER IN hmong0.500000
hmong0.500000
LOWER IN karen0.500000
LOWER IN myanmar0.500000
LOWER IN hmong 2nd generation0.500000
hmong 2nd generation0.500000
LOWER IN china0.250000
LOWER IN rural community0.200000
low bmi0.166667
LOWER IN low bmi0.166667
rural community0.142857
LOWER IN high bmi0.142857
LOWER IN united states of america0.125000
high bmi0.125000
female0.030303
adult0.012987
china0.011628
homo sapiens0.006369
united states of america0.005376
feces0.004975
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
thailand0.642857
adult0.571429
female0.428571
united states of america0.285714
hmong0.285714
rural community0.214286
karen0.214286
myanmar0.214286
china0.214286
LOWER IN united states of america0.142857
LOWER IN hmong0.142857
LOWER IN thailand0.071429
LOWER IN rural community0.071429
LOWER IN china0.071429
LOWER IN karen0.071429
LOWER IN myanmar0.071429
low bmi0.071429
LOWER IN high bmi0.071429
LOWER IN hmong 2nd generation0.071429
hmong 2nd generation0.071429
high bmi0.071429
LOWER IN low bmi0.071429
Exp. ID User ID Description Date Region Flag Sequences
400amnonpositively correlated with bmi ( high in high bmi compared to low bmi in homo sapiens feces thailand adult )2018-11-18v4No1 / 6
400amnonhigh freq. in hmong (chinese) females from thailand (highfreq homo sapiens, feces, adult, female, thailand, hmong, china)2018-11-18v4No1 / 13
400amnonhigh freq. in karen (burma) females from thailand (highfreq homo sapiens, feces, adult, female, thailand, karen, myanmar)2018-11-18v4No1 / 14
400amnonhigh freq. in feces of european american females (highfreq homo sapiens, feces, united states of america, adult, female)2018-11-18v4No1 / 17
400amnonhigher in children of hmong migrands born in the usa compared to non-migrant usa people ( high in hmong 2nd generation hmong compared to united states of america in homo sapiens feces )2018-11-18v4No1 / 41
400amnonlower in children of hmong migrands born in the usa compared to non-migrant usa people ( high in united states of america compared to hmong 2nd generation hmong in homo sapiens feces )2018-11-18v4No1 / 52
400amnonnegatively correlated with bmi ( high in low bmi compared to high bmi in homo sapiens feces thailand adult )2018-11-18v4No1 / 70
400amnoncommon in feces of european american females (common homo sapiens, feces, united states of america, adult, female)2018-11-18v4No1 / 95
400amnoncommon in hmong (chinese) females from thailand (common homo sapiens, feces, adult, female, thailand, hmong, china)2018-11-18v4No1 / 95
400amnoncommon in karen (burma) females from thailand (common feces, homo sapiens, female, adult, myanmar, thailand, karen)2018-11-18v4No1 / 132
400amnonhigher in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in hmong china compared to karen myanmar in homo sapiens feces thailand rural community )2018-11-18v4No1 / 135
400amnonlower in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in karen myanmar compared to hmong china in homo sapiens feces thailand rural community )2018-11-18v4No1 / 329
400amnonlower in people from thailand compared to 2nd generation immigrants to usa ( high in united states of america compared to thailand rural community in homo sapiens feces )2018-11-18v4No1 / 343
400amnonhigher in people from thailand compared to 2nd generation immigrants to usa ( high in thailand rural community compared to united states of america in homo sapiens feces )2018-11-18v4No1 / 378

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