dbBact

Field	Description
name	gut microbiota is associated with obesity and cardiometabolic disease in a population in the midst of westernization
qiita	11993
datamd5	5203632c5d1116d9bed12824ef3de304
mapmd5	e6da38d7e8edd3c825b08f947d63810f

term enrichment score

Term	Score
colombia	0.279070
columbia	0.200000
bogota	0.125000
LOWER IN municipality of santiago de cali	0.125000
LOWER IN bucaramanga	0.125000
LOWER IN barranquilla	0.125000
municipality of santiago de cali	0.125000
bucaramanga	0.125000
barranquilla	0.125000
LOWER IN bogota	0.125000
LOWER IN medellin metropolitan area	0.125000
low fiber	0.125000
hard stool	0.125000
LOWER IN normal stool	0.125000
high filber	0.125000
LOWER IN low fiber	0.125000
normal stool	0.125000
LOWER IN hard stool	0.125000
high hdl	0.125000
LOWER IN low hdl	0.125000
low hdl	0.125000
LOWER IN high hdl	0.125000
medellin metropolitan area	0.117647
lean body mass	0.117647
LOWER IN plant fiber cell	0.117647
plant fiber cell	0.117647
LOWER IN lean body mass	0.117647
LOWER IN high fiber	0.100000
low bmi	0.086957
LOWER IN low bmi	0.086957
LOWER IN high bmi	0.083333
city	0.080000
high bmi	0.071429
obesity	0.068966
LOWER IN male	0.051282
LOWER IN female	0.047619
male	0.032258
female	0.022222
adult	0.009050
homo sapiens	0.005747
feces	0.004914

Fraction of dbbact annotations with this term covered by the query

Term	Score
bogota	0.500000
LOWER IN municipality of santiago de cali	0.500000
LOWER IN bucaramanga	0.500000
LOWER IN barranquilla	0.500000
municipality of santiago de cali	0.500000
bucaramanga	0.500000
barranquilla	0.500000
LOWER IN bogota	0.500000
LOWER IN medellin metropolitan area	0.500000
low fiber	0.500000
hard stool	0.500000
LOWER IN normal stool	0.500000
high filber	0.500000
LOWER IN low fiber	0.500000
normal stool	0.500000
LOWER IN hard stool	0.500000
high hdl	0.500000
LOWER IN low hdl	0.500000
low hdl	0.500000
LOWER IN high hdl	0.500000
medellin metropolitan area	0.333333
lean body mass	0.333333
LOWER IN plant fiber cell	0.333333
columbia	0.333333
plant fiber cell	0.333333
LOWER IN lean body mass	0.333333
colombia	0.166667
LOWER IN high fiber	0.166667
low bmi	0.111111
LOWER IN low bmi	0.111111
LOWER IN high bmi	0.100000
high bmi	0.071429
obesity	0.066667
city	0.041667
LOWER IN male	0.040000
LOWER IN female	0.035714
male	0.020833
female	0.013158
adult	0.004545
homo sapiens	0.002882
feces	0.002463

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
city	1.000000
adult	1.000000
colombia	0.857143
columbia	0.142857
bogota	0.071429
medellin metropolitan area	0.071429
LOWER IN municipality of santiago de cali	0.071429
LOWER IN bucaramanga	0.071429
LOWER IN barranquilla	0.071429
female	0.071429
LOWER IN male	0.071429
lean body mass	0.071429
low bmi	0.071429
LOWER IN high bmi	0.071429
municipality of santiago de cali	0.071429
bucaramanga	0.071429
barranquilla	0.071429
LOWER IN bogota	0.071429
LOWER IN medellin metropolitan area	0.071429
low fiber	0.071429
LOWER IN high fiber	0.071429
LOWER IN plant fiber cell	0.071429
hard stool	0.071429
LOWER IN normal stool	0.071429
plant fiber cell	0.071429
high filber	0.071429
LOWER IN low fiber	0.071429
normal stool	0.071429
LOWER IN hard stool	0.071429
high hdl	0.071429
LOWER IN low hdl	0.071429
high bmi	0.071429
obesity	0.071429
LOWER IN lean body mass	0.071429
LOWER IN low bmi	0.071429
male	0.071429
LOWER IN female	0.071429
low hdl	0.071429
LOWER IN high hdl	0.071429

Number of experiments associating the term to the sequence

Term	Score
bogota	1.000000
medellin metropolitan area	1.000000
LOWER IN municipality of santiago de cali	1.000000
LOWER IN bucaramanga	1.000000
LOWER IN barranquilla	1.000000
feces	1.000000
homo sapiens	1.000000
city	1.000000
adult	1.000000
colombia	1.000000
female	1.000000
LOWER IN male	1.000000
lean body mass	1.000000
low bmi	1.000000
LOWER IN high bmi	1.000000
municipality of santiago de cali	1.000000
bucaramanga	1.000000
barranquilla	1.000000
LOWER IN bogota	1.000000
LOWER IN medellin metropolitan area	1.000000
low fiber	1.000000
LOWER IN high fiber	1.000000
LOWER IN plant fiber cell	1.000000
hard stool	1.000000
LOWER IN normal stool	1.000000
columbia	1.000000
plant fiber cell	1.000000
high filber	1.000000
LOWER IN low fiber	1.000000
normal stool	1.000000
LOWER IN hard stool	1.000000
high hdl	1.000000
LOWER IN low hdl	1.000000
high bmi	1.000000
obesity	1.000000
LOWER IN lean body mass	1.000000
LOWER IN low bmi	1.000000
male	1.000000
LOWER IN female	1.000000
low hdl	1.000000
LOWER IN high hdl	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
404	amnon	negatively correlated with hdl levels ( high in low hdl compared to high hdl in feces homo sapiens city adult colombia )	2019-01-10	v4	1 / 4	approved	No
404	amnon	high in male compared to female in feces homo sapiens city adult colombia	2018-11-20	v4	1 / 13	approved	No
404	amnon	high in high bmi obesity compared to lean body mass low bmi in feces homo sapiens city adult colombia	2018-11-20	v4	1 / 14	approved	No
404	amnon	positively correlated with hdl levels ( high in high hdl compared to low hdl in feces homo sapiens city adult colombia )	2019-01-10	v4	1 / 17	approved	No
404	amnon	dominant feces, homo sapiens, city, adult, colombia	2018-11-20	v4	1 / 19	approved	No
404	amnon	high in normal stool compared to hard stool in feces homo sapiens city adult columbia	2018-11-20	v4	1 / 21	approved	No
404	amnon	positively correlated with fiber intake ( high in plant fiber cell high filber compared to low fiber in feces homo sapiens city adult colombia )	2018-11-20	v4	1 / 22	approved	No
404	amnon	high in hard stool compared to normal stool in feces homo sapiens city adult columbia	2018-11-20	v4	1 / 27	approved	No
404	amnon	negatively correlated with fiber intake ( high in low fiber compared to high fiber plant fiber cell in feces homo sapiens city adult colombia )	2018-11-20	v4	1 / 32	approved	No
404	amnon	high in municipality of santiago de cali bucaramanga barranquilla compared to bogota medellin metropolitan area in feces homo sapiens city adult colombia	2018-11-20	v4	1 / 71	approved	No
404	amnon	common feces, homo sapiens, city, adult, colombia	2018-11-20	v4	1 / 79	approved	No
404	amnon	high in lean body mass low bmi compared to high bmi in feces homo sapiens city adult colombia	2018-11-20	v4	1 / 84	approved	No
404	amnon	high in female compared to male in feces homo sapiens city adult colombia	2018-11-20	v4	1 / 88	approved	No
404	amnon	high in bogota medellin metropolitan area compared to municipality of santiago de cali bucaramanga barranquilla in feces homo sapiens city adult colombia	2018-11-20	v4	1 / 237	approved	No

Experiment ID: 404

Annotations for experiment: