Experiment ID: 404

Field Description
namegut microbiota is associated with obesity and cardiometabolic disease in a population in the midst of westernization
qiita11993
datamd55203632c5d1116d9bed12824ef3de304
mapmd5e6da38d7e8edd3c825b08f947d63810f

Annotations for experiment:

term enrichment score
TermScore
colombia0.324324
columbia0.222222
bogota0.125000
LOWER IN municipality of santiago de cali0.125000
LOWER IN bucaramanga0.125000
LOWER IN barranquilla0.125000
barranquilla0.125000
bucaramanga0.125000
municipality of santiago de cali0.125000
LOWER IN bogota0.125000
LOWER IN medellin metropolitan area0.125000
low fiber0.125000
hard stool0.125000
LOWER IN normal stool0.125000
high filber0.125000
LOWER IN low fiber0.125000
normal stool0.125000
LOWER IN hard stool0.125000
high hdl0.125000
LOWER IN low hdl0.125000
low hdl0.125000
LOWER IN high hdl0.125000
medellin metropolitan area0.117647
LOWER IN male0.117647
lean body mass0.117647
LOWER IN plant fiber cell0.117647
plant fiber cell0.117647
LOWER IN lean body mass0.117647
LOWER IN high fiber0.105263
obesity0.105263
city0.100000
low bmi0.086957
LOWER IN low bmi0.086957
male0.086957
LOWER IN high bmi0.083333
high bmi0.080000
LOWER IN female0.055556
female0.028169
adult0.013986
homo sapiens0.008475
feces0.007273
Fraction of dbbact annotations with this term covered by the query
TermScore
bogota0.500000
LOWER IN municipality of santiago de cali0.500000
LOWER IN bucaramanga0.500000
LOWER IN barranquilla0.500000
barranquilla0.500000
bucaramanga0.500000
municipality of santiago de cali0.500000
LOWER IN bogota0.500000
LOWER IN medellin metropolitan area0.500000
low fiber0.500000
columbia0.500000
hard stool0.500000
LOWER IN normal stool0.500000
high filber0.500000
LOWER IN low fiber0.500000
normal stool0.500000
LOWER IN hard stool0.500000
high hdl0.500000
LOWER IN low hdl0.500000
low hdl0.500000
LOWER IN high hdl0.500000
medellin metropolitan area0.333333
LOWER IN male0.333333
lean body mass0.333333
LOWER IN plant fiber cell0.333333
plant fiber cell0.333333
LOWER IN lean body mass0.333333
colombia0.200000
LOWER IN high fiber0.200000
obesity0.200000
low bmi0.111111
LOWER IN low bmi0.111111
male0.111111
LOWER IN high bmi0.100000
high bmi0.090909
city0.052632
LOWER IN female0.045455
female0.017544
adult0.007042
homo sapiens0.004255
feces0.003650
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
feces1.000000
adult1.000000
city1.000000
colombia0.857143
columbia0.142857
medellin metropolitan area0.071429
bogota0.071429
LOWER IN municipality of santiago de cali0.071429
LOWER IN bucaramanga0.071429
LOWER IN barranquilla0.071429
female0.071429
LOWER IN male0.071429
lean body mass0.071429
low bmi0.071429
LOWER IN high bmi0.071429
barranquilla0.071429
bucaramanga0.071429
municipality of santiago de cali0.071429
LOWER IN bogota0.071429
LOWER IN medellin metropolitan area0.071429
low fiber0.071429
LOWER IN plant fiber cell0.071429
LOWER IN high fiber0.071429
hard stool0.071429
LOWER IN normal stool0.071429
plant fiber cell0.071429
high filber0.071429
LOWER IN low fiber0.071429
normal stool0.071429
LOWER IN hard stool0.071429
high hdl0.071429
LOWER IN low hdl0.071429
high bmi0.071429
LOWER IN lean body mass0.071429
LOWER IN low bmi0.071429
obesity0.071429
male0.071429
LOWER IN female0.071429
low hdl0.071429
LOWER IN high hdl0.071429
Exp. ID User ID Description Date Region Flag Sequences
404amnonnegatively correlated with hdl levels ( high in low hdl compared to high hdl in colombia city adult feces homo sapiens )2019-01-10v4No1 / -4
404amnon high in male compared to female in feces homo sapiens city adult colombia 2018-11-20v4No1 / 5
404amnon high in high bmi obesity compared to lean body mass low bmi in homo sapiens feces adult colombia city 2018-11-20v4No1 / 6
404amnonpositively correlated with hdl levels ( high in high hdl compared to low hdl in colombia city adult feces homo sapiens )2019-01-10v4No1 / 9
404amnondominant homo sapiens, feces, colombia, city, adult2018-11-20v4No1 / 11
404amnon high in normal stool compared to hard stool in homo sapiens feces columbia city adult 2018-11-20v4No1 / 13
404amnonpositively correlated with fiber intake ( high in plant fiber cell high filber compared to low fiber in homo sapiens feces adult colombia city )2018-11-20v4No1 / 14
404amnon high in hard stool compared to normal stool in homo sapiens feces columbia city adult 2018-11-20v4No1 / 19
404amnonnegatively correlated with fiber intake ( high in low fiber compared to plant fiber cell high fiber in homo sapiens feces adult colombia city )2018-11-20v4No1 / 24
404amnon high in barranquilla bucaramanga municipality of santiago de cali compared to bogota medellin metropolitan area in homo sapiens feces adult colombia city 2018-11-20v4No1 / 63
404amnoncommon homo sapiens, feces, colombia, city, adult2018-11-20v4No1 / 71
404amnon high in lean body mass low bmi compared to high bmi in homo sapiens feces adult colombia city 2018-11-20v4No1 / 76
404amnon high in female compared to male in homo sapiens feces adult colombia city 2018-11-20v4No1 / 80
404amnon high in medellin metropolitan area bogota compared to municipality of santiago de cali bucaramanga barranquilla in homo sapiens feces adult colombia city 2018-11-20v4No1 / 229

Problems / suggestions? Please email info AT dbbact DOT org