dbBact

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Experiment ID: 41

Field	Description
name	amplicon sequencing of mice colonic microbiota
name	chronic psychological stress disrupted the composition of the murine colonic microbiota and accelerated a murine model of inflammatory bowel disease
sra	drp003050
sra	prjdb4266
datamd5	cd5207ab04e71db08b88eee1ac325196
mapmd5	815c0897be67858bcc1914fba0584f65

Annotations for experiment:

term enrichment score

Term	Score
tcr-alpha knockout	0.666667
stress	0.400000
LOWER IN stress	0.400000
japan	0.166667
mus musculus	0.031746
research facility	0.015625
LOWER IN control	0.012346
control	0.012270
feces	0.007273

Fraction of dbbact annotations with this term covered by the query

Term	Score
tcr-alpha knockout	0.500000
stress	0.333333
LOWER IN stress	0.333333
japan	0.090909
mus musculus	0.016129
research facility	0.007874
LOWER IN control	0.006250
control	0.006211
feces	0.003650

Fraction of annotations for the query sequences containing the term

Term	Score
mus musculus	1.000000
research facility	1.000000
feces	1.000000
tcr-alpha knockout	1.000000
japan	1.000000
stress	0.500000
LOWER IN control	0.500000
control	0.500000
LOWER IN stress	0.500000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
41	amnon	lower in water stress compared to control in tcr-b deficient mice ( high in control compared to stress in mus musculus research facility feces tcr-alpha knockout japan )	2016-12-10	v4	No	1 / -6
41	amnon	higher in water stress compared to control in tcr-b deficient mouse ( high in stress compared to control in mus musculus research facility feces tcr-alpha knockout japan )	2016-12-10	v4	No	1 / -5

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